Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2950 ATGCTACCCAATTTCATCAAGAATCTAGCTTGTTGGCAGATTCTCTTCATAATCCTTTGGATTCTTTTAACAATCTTTTTTCCTCAACAAGTTGCTGGTTTTTCAAAAATTACTTCTATTCATGATCAAGCTGCCATTGAAGACAGTGAAGCAAATGCCCTGTTGAAGTGGAAAGATAGCTTTGATAACCACAGCCAAGCTCTCTTGTCAACTTGGACAAGAAATACTAGTCCATGCAAATGGGAAGGAATTCAGTGTGACAAATCCAAATCCATCTCTAGCATAAATCTTGCAAACTATGGACTAAAAGGTAAACTCCACACTCTTAGCTTCTCCTCATTCCCCAACCTCCTCAACATAAGCATCTTCAACAACTCCTTTTATGGAACCATTCCTCCACAAATTGGTAACATGTCCAAAATAAATGTTTTGAACCTTTCTGCAAACCCACTTGAAGGTTCCATCCCCAAAGAAATGTGGACATTAAGGAGTTTAAAAGGCCTTGATCTTTCTGTATGTCAACTAAGTGGGGAAATTTCTAATTCCATAGGAAACTTGTCCAACCTATTATATCTAGATTTCACTTACACCAAGTTTTCTAGAGGCTACATTCCTCGTGAAATTGGAAAGTTGAACCAATTAGAGTATCTAGCGATTAAAGAATGTAACCGTATTGGTCCCATTCCCCAAGAAATTGGAATGTTAACAAAACTTGGTGTTCTGGATTTCGCTGGGAACACTCTATCTGGGACCATCCCACAAACAATTGGTAACATGACCAATTTAAGTCAACTTTACCTTTCTAATAACACATTGTTGTCTGGAACAATCCCACCCTCCTTGTGGAACATGTCTTACTTGTCCATTCTCTACCTTAGTAAAAATAATCTTTCTGGATCAATCCCTCCTTCTATACAAAACTTGGTCAATTTGAGGGAATTTTCACTTCATTCCAACAAATTTTCTGGACCTATTCTTTCCAGAATCGGAAACTTGACAGAGCTAAGGATATTATTCTTGTACGCTAATCATTTTTCTGGATCAATTCCCGCATCTATTGGAAATCTAATCAATATATGGACCCTCAGTTTGTTTGATAACAATCTTTCTGGAACTATTCCTGCTACAATTGGAAATTTGACAGGGCTAACCGTCTTGGAAGTAGCCACCAATAAATTGCATGGTAGCATTCCACAAAGCCTATATAACTTTACCGACTGGGATTCATTTTTCTTAGCCGAGAATGATTTTATTGGCCATTTGCCACCTCAAATATGTTCTGGTGGATATCTACTATACCTCGGTGTGTTTCGCAACCATTTCACTGGTCCGGTACCAACAAGCTTGAAAAACTGCTCTACTATTGAAAGAATCAGGCTTGAGGGTAATCAAATAGAAGGAGATATAGCACGAGATTTCAGTGTATATCCAAATTTGAATTACATTGATCTAAGTGACAATAAATTTTATGGTCACATTTCACCAAACTGGGGAAAGTGCCCAAATCTTACTACCTTGATGATATCCAACAATAATATCTCTGGTGACATACCATTAACACTTTTTGAGGCAAACAAGCTAAGCAAGCTCCACCTTTCTTCAAACCACCTGACAGGAAAGCTTCCAAAGGAACTTGGGTACCTGAAATCATTACTTTATGTTAAGATCAACAACAATAACCTTTCAGGAAATATTCCGAGTGAAATTGGGTTGTTACATAATCTCATAAATTTGGATGTAGGAGGAAACATGTTGAATGGCACAATACCAACAGAAGTTGTGACGTTACCTCTGTTACAGAACTTGAATTTGAGCAAAAACAAATTTGAAGGAAGAATTCCCTCAGACTTTGGTCAGTTACGGCCTCTTGAATCTCTTGATCTTAGCGGGAATTTGTTGAGTGGAACAATACCAACAGTTCTAGGAGAGTTAAAGCAATTGCGAAAGCTAAATTTGTCATGCAATAATCTTTCTGGCACCATTCCATCCAGTTTTGAGGATGCCAATGCGATGTCAAGTTTGACTGATGTCAACATATCAAACAACCAGTTAGAAGGGAGGCTGCCAAATCATCAAGCCTTTCTCAAGGCTCCAATTGAATCATTAAAAAATAACAAAAACTTGTGTGGTAATCACACTGGCTTGGTGCTTTGCCCAACCAGCCACAGTCAAAAGAGCCACAAGACCATCCTACTGGTATTTTTTCTTATCTTAGGTGCTCTAGTACTAGTACTTTGTGGAGTGGGAATTTCAATGTATATTCTTTATCGGAGAGGAAGAAAGACAAAAACCAAGGATAAAGATTCTAATGAAGCACAAGCAGAAGAAGTCTTTTCCATATGGAGTCATGATGGAAAAATGATGTTTGAAAATATCATTGAAGCTACCAATAATTTTGATGACGATTTTCTCATTGGAGTGGGAGGGGAAGGATCTGTTTACAAGGCTAAGTTGTCTCCAGATATGGTTTTTGCAGTGAAGAAACTTCATTTGAGAATAGATGGGGAGAGGCCCAATATCAAAGCCTTTGAAAGTGAAATTCAAGCTTTGACAGAAATCAGGCATCGTAACATCATAAAGCTCTATGGATATTGCCAACATTCAAGATTCTCATTTTTGGTTTATAAGTTCTTGGAAGGGGGAACTTTGGCTCAAATGCTAAACAATGAAACACAAGCCATTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAGAGGTGTGGCTAAAGCTTTGTCCTATATGCATCATGACTGCGTGCCTCCAATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTGGATTTATCATATGAAGCTCAACTTTCTGATTTTGGAACAGCCAGGTTTCTAAAGCCTGATTCAAGCAGCTGGACCACATTTCAAGGCACCTACGGATATGCAGCTCCAGAATTTTCCCAGACGATGGAAGTGACCGAGAAGTGTGACGTTTACAGCTTTGGAGTTCTATGTTTTGAAATCCTTCTGGGAAAGCATCCAGCCGATTTCATTTCTTCGTTGTTCTCATCATCTACAGCAACAATGACTTATAATTTGCTGTTGATTGATGTGTTAGACAATCGCCCTCCTCAACCTACCAATTCAATTGTTGGGGATGTCATCTTGATTACAAGATTGGCATTTTCTTGCTTGAGTGTAAGTCCAACTTCTCGCCCCACCATGGATTATGTTTCAAAAGAACTTTTGATGAGAAAATCACAATCACCTTTAGTGGACCAGTTCTCCCAGATCAGACTTGGACAACTCCACTAA 3276 0.3849 MLPNFIKNLACWQILFIILWILLTIFFPQQVAGFSKITSIHDQAAIEDSEANALLKWKDSFDNHSQALLSTWTRNTSPCKWEGIQCDKSKSISSINLANYGLKGKLHTLSFSSFPNLLNISIFNNSFYGTIPPQIGNMSKINVLNLSANPLEGSIPKEMWTLRSLKGLDLSVCQLSGEISNSIGNLSNLLYLDFTYTKFSRGYIPREIGKLNQLEYLAIKECNRIGPIPQEIGMLTKLGVLDFAGNTLSGTIPQTIGNMTNLSQLYLSNNTLLSGTIPPSLWNMSYLSILYLSKNNLSGSIPPSIQNLVNLREFSLHSNKFSGPILSRIGNLTELRILFLYANHFSGSIPASIGNLINIWTLSLFDNNLSGTIPATIGNLTGLTVLEVATNKLHGSIPQSLYNFTDWDSFFLAENDFIGHLPPQICSGGYLLYLGVFRNHFTGPVPTSLKNCSTIERIRLEGNQIEGDIARDFSVYPNLNYIDLSDNKFYGHISPNWGKCPNLTTLMISNNNISGDIPLTLFEANKLSKLHLSSNHLTGKLPKELGYLKSLLYVKINNNNLSGNIPSEIGLLHNLINLDVGGNMLNGTIPTEVVTLPLLQNLNLSKNKFEGRIPSDFGQLRPLESLDLSGNLLSGTIPTVLGELKQLRKLNLSCNNLSGTIPSSFEDANAMSSLTDVNISNNQLEGRLPNHQAFLKAPIESLKNNKNLCGNHTGLVLCPTSHSQKSHKTILLVFFLILGALVLVLCGVGISMYILYRRGRKTKTKDKDSNEAQAEEVFSIWSHDGKMMFENIIEATNNFDDDFLIGVGGEGSVYKAKLSPDMVFAVKKLHLRIDGERPNIKAFESEIQALTEIRHRNIIKLYGYCQHSRFSFLVYKFLEGGTLAQMLNNETQAIAFDWEKRVNVVRGVAKALSYMHHDCVPPIVHRDISSKNVLLDLSYEAQLSDFGTARFLKPDSSSWTTFQGTYGYAAPEFSQTMEVTEKCDVYSFGVLCFEILLGKHPADFISSLFSSSTATMTYNLLLIDVLDNRPPQPTNSIVGDVILITRLAFSCLSVSPTSRPTMDYVSKELLMRKSQSPLVDQFSQIRLGQLH* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2950 1091 Gene3D Ribonuclease Inhibitor 202 299 IPR032675 -
Mal3g2950 1091 ProSiteProfiles Protein kinase domain profile. 799 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2950 1091 PANTHER LRR RECEPTOR-LIKE KINASE 13 194 - -
Mal3g2950 1091 Pfam Protein kinase domain 804 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2950 1091 SMART LRR_typ_2 671 696 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 138 162 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 596 620 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 500 524 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 332 356 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 644 667 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 259 284 IPR003591 -
Mal3g2950 1091 SMART LRR_typ_2 380 404 IPR003591 -
Mal3g2950 1091 Gene3D Transferase(Phosphotransferase) domain 1 878 1084 - -
Mal3g2950 1091 SUPERFAMILY L domain-like 70 394 - -
Mal3g2950 1091 Gene3D Ribonuclease Inhibitor 407 719 IPR032675 -
Mal3g2950 1091 Pfam Leucine rich repeat 598 657 IPR001611 GO:0005515
Mal3g2950 1091 ProSitePatterns Tyrosine protein kinases specific active-site signature. 923 935 IPR008266 GO:0004672|GO:0006468
Mal3g2950 1091 Gene3D Ribonuclease Inhibitor 300 406 IPR032675 -
Mal3g2950 1091 Gene3D Ribonuclease Inhibitor 47 201 IPR032675 -
Mal3g2950 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 194 - -
Mal3g2950 1091 SUPERFAMILY Protein kinase-like (PK-like) 782 1070 IPR011009 -
Mal3g2950 1091 PANTHER LRR RECEPTOR-LIKE KINASE 189 263 - -
Mal3g2950 1091 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515
Mal3g2950 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 263 1090 - -
Mal3g2950 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 189 263 - -
Mal3g2950 1091 Pfam Leucine rich repeat N-terminal domain 48 87 IPR013210 -
Mal3g2950 1091 Gene3D Phosphorylase Kinase; domain 1 759 877 - -
Mal3g2950 1091 SUPERFAMILY RNI-like 362 691 - -
Mal3g2950 1091 PANTHER LRR RECEPTOR-LIKE KINASE 263 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2950 Mal-Chr3 104159081 104162750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2950 44 971 Receptor kinase-like Gene Family AT4G08850 44.208 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g2950 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2950 - - gmx:100815688 1456.43