Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2946 ATGTCACTAACCACGTTCATCATGATTCTGTTCATAATTCTCTTCATTTCATGGCCACAAGCTGTAGCTCAAAACATTGAAGCACAAGCTCTCTTAAAATGGAAAGATAGCTTTGACAACCAAAGTCAAGCTCTCTTGTCAACTTGGAAAAATACCACAAATCCATGCAAATGGCAAGGAATTCATTGTGACAACTCAAATTCCATTCCTACCATAAACCTTGAAAATTTTGGACTAAAAGGTACACTTCACTCTCTCACCTTTTCTTCATTCACAAACCTCACAACCCTAAATATCTATAATAACCATTTTAATGGGACAATTCCCCCACAAATAGGTAACTTGTCAAAAATAAATACATTGAATTTTTCTTTAAATCCTATTGATGGTTCCATTCCTCAAGAAATGTTTACATTAAAAAGTTTACAAAAGATTGATTTTTTCTTTTGTAAATTAAGTGGAGCAATTCCTAATTCCATAGGAAATTTAACCAACCTATTGTATCTAGATTTAGGAGGCAATGATTTTTCTGGTGGCCCTATTCCTCCTGAGATTGGAAAATTGAACAAATTAGGATTTCTAGCAATTCCAAATAGTAACCTTATTGGTTCTATTCCAAAAGAAATAGGGTTTTTGACAAACCTTACTTATATTGATTTGGCAACAAATTCTTTATCTGGTGTTATCCCTGAAACCATAGGCAACATGAGTAAATTGAATATACTTAGCCTTTCTAATAACACCAAGATTTCTGGACCAATTCCACACTCCTTGTGGAACATGTCTAGCTTGGACTGGGTCCTACTTTATAACATGAGTCTTTCTGGTTCAATCCCTGATTCTATAGAAAACTTGGTTAATGTGACTGACATTTCAATTGATCGCAATCGCCTTTCTGGAACCATTCCTTCCACAATTGGAAACTTGAAAAATCTCGTATATTTGTTTTTGGGAATGAATCGTTTTTCAGGATCAATTCCTGCCTCTATAGGAAATTTGATCAATTTGGATACCCTTAGTCTCCAAGCAAACAATCTCTCAGGAACTATACCAACTTCAATTGGAAATTTGAAGCAGCTCACTGTCTTTGAAGTATCTAAAAATAAACTTCATGGTAGAATTCCAAATGAACTTGATAACATTACCAATTGGTTTTCCTTTCTTGTGGCTGAGAATGATTTTGTTGGCCATTTGCCATCTCAAATATGCTCTGGTGGATCATTAATGTACTTAAGTGCTCAACACAACCGTTTAACTGGTCCAGTACCAACGAGTTTGAAAAACTGTTCAAGCATTGTAAGAATCAGAATTGAGGCAAATCAAATAGAAGGTGATATAGCACAAGATTTTGGTGTGTATCCGAATTTGCGATACTTTGATGCGAGTGATAATAAATTTCATGGACACATTTCACCAAACTGGGGAAAGTGTCCTAATCTTGATAATTTCAAGATATCCAACAATAATGTTTCTGGTATTATACCATTAGAACTTATGGTTTTAACCAAGCTAGGTAGGCTTCATCTTTCTTCAAATCAATTGACTGGGAAACTTCCAAAGGAATTAGGAGACATGACATCATTAGTTGAACTCAAGATTAGTAACAATCATTTCTCAGATAACATCCCAACAGAAATTGGATTGCTGCAAACACTGAATGAATTGGACCTCGGAGGAAACGAGTTGAGTGGCACGATACCGAAAGAAGTTGCAAAGCTACCGAGGTTACAAATGTTGAATTTGAGCAGAAACAAAATTGAAGGAAGTATTCCATCTCAGTTTGGTTTAGCTCTTGAGTCACTTGATCTTAGTGGCAATCTTTTGAATGGAGAAATACCAACAGCTCTTGAAGACTTGGTGCAGTTGTCAATGTTGAATCTCTCACACAATATGCTTTCAGGAACCATTCCTCAAAATTTTGAAAGGAATTTGGTTTTTGTTAATATATCAGACAACCAGTTAGAAGGTCCACTTCCTAAAATTCCGGCTTTTCTTCTTGCTCCGTTTGAATCATTAAAAAACAACAGAGGATTATGTGGAAATAACACGAGTTTGGTTCCTTGTGCAATAAACCATAGTCGAAAGAGCAAAAATGTCCTTCGATCGGTATTCATTGCTTTAGGAGCGCTAATATTAGTGTTGTGTGGTGTTGGAATTTCGATGTATATTTTGTGTCGAAGAAAACCATCAAAGGTAAAAAACCAAACTGGAAATGAAGCACAAAGGGGAGTCATATTTTCAAATTGGAGTAATGATGCGAAAATGACGTTTGAAGATATCATTGATGCTACAGAGAATTTTGATGACAAGTATCTCATTGGAGTTGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTGTCCAGAGGTTCGGTTGTTGAAATCTTTGCTGTGAAGAAGCTTCATTTATTAACAGATGATGAAATGTCAAAGTCTTTTACGAGTGAGATTGAAACCTTGAGAGGAATCAAACACAGGAACATCATTAACCTTCAAGGATATTGCAAACATTCTAGGTTCTCATTTTTGGTTTACAAGTTCATAGAAGGTGGAAGCTTAGATCAGATACTAAACAATGATAAACAAGCCATTGCATTTGATTGGGAAAAGAGGGTGAATGTTATTAAAGGTGTGGCCAATGCTTTCTCCTACTTGCATCATGATTGCTCACCTCCTATCATTCATCGGGATATATCGAGCAAGAATGTTCTTCTCAATCTTGACTATGAAGCTCATGTCTCCGACTTCGGGACTGCTAAGTTTCTAAAGCCTGATTTACCTAGTTGGACCCAATTTGCAGGCACTTTTGGGTATGCAGCTCCAGAATTGGCACAAACAATGGAAGTGAATGAGAAATGCGATGTATACAGTTTTGGAGTACTTGCTTTGGAAGTCATAATGGGAAAGCATCCAGGAGATCTCATTTCATTATTTTTGTCGCCATCGACAAGGCCAACGGCTAATGATATGTTGTTGATAGATGTTTTAGATCAAAGACCTCAACAAGTTATAAAACCAATTGATGAAGAAGTTATCTTGATTGCAAAGTTGGCAATTGCTTGCTTGAATCAGAATCCACGTTCTCGACCAACCATGGATCAAGTATGTAAGATGCTTGGAACAGGAAAATCATCATTGGAAAATCAACTTCACACCATCAAACTAGGACAACTTCATTAA 3177 0.3626 MSLTTFIMILFIILFISWPQAVAQNIEAQALLKWKDSFDNQSQALLSTWKNTTNPCKWQGIHCDNSNSIPTINLENFGLKGTLHSLTFSSFTNLTTLNIYNNHFNGTIPPQIGNLSKINTLNFSLNPIDGSIPQEMFTLKSLQKIDFFFCKLSGAIPNSIGNLTNLLYLDLGGNDFSGGPIPPEIGKLNKLGFLAIPNSNLIGSIPKEIGFLTNLTYIDLATNSLSGVIPETIGNMSKLNILSLSNNTKISGPIPHSLWNMSSLDWVLLYNMSLSGSIPDSIENLVNVTDISIDRNRLSGTIPSTIGNLKNLVYLFLGMNRFSGSIPASIGNLINLDTLSLQANNLSGTIPTSIGNLKQLTVFEVSKNKLHGRIPNELDNITNWFSFLVAENDFVGHLPSQICSGGSLMYLSAQHNRLTGPVPTSLKNCSSIVRIRIEANQIEGDIAQDFGVYPNLRYFDASDNKFHGHISPNWGKCPNLDNFKISNNNVSGIIPLELMVLTKLGRLHLSSNQLTGKLPKELGDMTSLVELKISNNHFSDNIPTEIGLLQTLNELDLGGNELSGTIPKEVAKLPRLQMLNLSRNKIEGSIPSQFGLALESLDLSGNLLNGEIPTALEDLVQLSMLNLSHNMLSGTIPQNFERNLVFVNISDNQLEGPLPKIPAFLLAPFESLKNNRGLCGNNTSLVPCAINHSRKSKNVLRSVFIALGALILVLCGVGISMYILCRRKPSKVKNQTGNEAQRGVIFSNWSNDAKMTFEDIIDATENFDDKYLIGVGSQGNVYKAELSRGSVVEIFAVKKLHLLTDDEMSKSFTSEIETLRGIKHRNIINLQGYCKHSRFSFLVYKFIEGGSLDQILNNDKQAIAFDWEKRVNVIKGVANAFSYLHHDCSPPIIHRDISSKNVLLNLDYEAHVSDFGTAKFLKPDLPSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEVIMGKHPGDLISLFLSPSTRPTANDMLLIDVLDQRPQQVIKPIDEEVILIAKLAIACLNQNPRSRPTMDQVCKMLGTGKSSLENQLHTIKLGQLH* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2946 1058 SUPERFAMILY RNI-like 350 672 - -
Mal3g2946 1058 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mal3g2946 1058 Pfam Protein kinase domain 769 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2946 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 240 1057 - -
Mal3g2946 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 240 1057 - -
Mal3g2946 1058 SUPERFAMILY RNI-like 72 380 - -
Mal3g2946 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 168 244 - -
Mal3g2946 1058 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Mal3g2946 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 11 171 - -
Mal3g2946 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 171 - -
Mal3g2946 1058 SMART LRR_typ_2 619 643 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 91 115 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 501 525 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 333 357 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 163 188 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 212 235 IPR003591 -
Mal3g2946 1058 SMART LRR_typ_2 573 596 IPR003591 -
Mal3g2946 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 244 - -
Mal3g2946 1058 SUPERFAMILY Protein kinase-like (PK-like) 747 1038 IPR011009 -
Mal3g2946 1058 Gene3D Ribonuclease Inhibitor 272 383 IPR032675 -
Mal3g2946 1058 Gene3D Ribonuclease Inhibitor 179 271 IPR032675 -
Mal3g2946 1058 Gene3D Transferase(Phosphotransferase) domain 1 847 1053 - -
Mal3g2946 1058 Pfam Leucine rich repeat 213 269 IPR001611 GO:0005515
Mal3g2946 1058 ProSitePatterns Tyrosine protein kinases specific active-site signature. 892 904 IPR008266 GO:0004672|GO:0006468
Mal3g2946 1058 Gene3D Ribonuclease Inhibitor 384 689 IPR032675 -
Mal3g2946 1058 ProSiteProfiles Protein kinase domain profile. 767 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2946 1058 Gene3D Phosphorylase Kinase; domain 1 728 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2946 Mal-Chr3 103956602 103959919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2946 8 940 Receptor kinase-like Gene Family AT4G08850 41.736 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g2946 Pkinase 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2946 - - gmx:100815688 1318.14