Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2905 ATGGCCGGCATAGACTTGGGTTCAGCATCACAACACTTTGTTCATCGCCTTCAACGCCCGGACCTTGAAGTTCATGATGAGAGTCAAGACCAAGATGGAAACAACAACAACCATGAAGGGCTTGACCTAGTTTCACCAAATCATGGTGGTCTTGGTGATGTTGTTGGTCGTAGACCGAGGGGAAGACCTCCAGGCTCAAAGAACAAACCTAAACCACCGGTGATCATCACAAGAGAGAGTGCAAACACACTTAGGGCTCACATCCTTGAAGTTAGTAGTGGTTGTGATGTGTTTGACTCTGTGGCTAACTATGCAAGAAAGCGTCAACGAGGGATCTGTGTCCTTAGTGGGAGTGGAACTGTCACCAACGTGACCCTGCGACAGCCAGCTGCCGCAGGATCTGTGGTGACACTTCACGGAAGATTTGAGATATTATCTTTATCTGGATCATTTCTACCACCACCAGCTCCTCCAGGAGCTACAAGTTTGAGTGTGTTCCTTGGTGGAGGCCAAGGTCAAGTTGTAGGAGGAAATGTTGTTGGTCCTTTGCTTGCTTCCGGACCGGTTATTGTTATTGCTTCATCTTTCACTAACGTAGCGTATGAGAGGTTACCATTGGATGAAGATGAATCTCTTCAGATGCAACAAGGACAATCATCTGCAGGTGGTGGTGGTGATGGTGTTAATAACTCTTTTCCCGATCCATCGTCGGGGCTTCCATTCTTCAATTTGCCTCTAAATATGCCTCAATTACCTGTGGATGGTTGGGCTGGAAACTCTGGTGGAAGACAATCTTATTGA 801 0.4707 MAGIDLGSASQHFVHRLQRPDLEVHDESQDQDGNNNNHEGLDLVSPNHGGLGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVANYARKRQRGICVLSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLSVFLGGGQGQVVGGNVVGPLLASGPVIVIASSFTNVAYERLPLDEDESLQMQQGQSSAGGGGDGVNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2905 266 PIRSF ESCAROLA 4 248 IPR014476 GO:0003680
Mal3g2905 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 266 - -
Mal3g2905 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 266 IPR014476 GO:0003680
Mal3g2905 266 CDD DUF296 85 167 IPR005175 -
Mal3g2905 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 198 IPR005175 -
Mal3g2905 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 212 - -
Mal3g2905 266 MobiDBLite consensus disorder prediction 210 236 - -
Mal3g2905 266 MobiDBLite consensus disorder prediction 24 75 - -
Mal3g2905 266 Gene3D - 84 219 - -
Mal3g2905 266 ProSiteProfiles PPC domain profile profile. 81 218 IPR005175 -
Mal3g2905 266 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2905 Mal-Chr3 103416338 103417138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2905 1 263 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.452 6.94e-101 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2905 - - gmx:100803960 407.527