Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2894 ATGGATTTGAGTAGCAGAATTTTCAGTGCTCCTGTTATTGTTAGTTGCTTTCTACTGATTATTTGTGGCATGACCTACGGTACTGATACGGACATCTTATGCTTAAGAAGGGTAAAAGAATCACTTAAAGACCCAAACAATTATTTGCAGAATTGGGATTTCAACAACAAAACTGAAGGGTCTATTTGCAAGTTCACTGGTGTTGAATGTTGGCATCCTGATGAAAATAGGGTTTTGAATCTCAAACTTTCCAATATGGGACTTAAGGGCGAGTTTCCTCGCGGTATTCAAAATTGCTCGAGCTTAACAGGATTAGATTTTTCGTTGAACAGTCTATCTAAAACCATTCCGAACGATATATCTATGCTTGTTACCTTTGTGACAACTCTTGATCTATCTTCAAATGATTTCATTGGAGAGATCCCTGTGTCCCTTTCTAATTGTACCTATCTTAATAGTCTTAAACTTGACCAAAACCAATTCACTGGTCAAATTCCTCTACAACTTGCTACGCTCACGCGGCTTAAGACATTTAGTGTTTCCAACAATCTTTTGTCGGGACCAGTTCCGAATTTTAAACAAGGTATAGTTACGGCAAATAGTTATGCGAATAATTCGGCCCTCTGCGGAGGTCCCTTGGAGCGTTGCCAGGTTAAGTCTTCAAAGACTAACACTGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTCTAGCAGCATTAGGAGTGGGCGTTGGATTGCTCTTCTTTGTACGCAGTGTTTCTCACAGGAAGAAGGAAGAAGATCCTGAAGGAAACAAGTGGGCAAGAATTCTTAAGGGAACCAAGAAAATAAAGGTTTCAATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAGTGATCTCATGAAGGCTACTAATAACTTCAGTAAAAGCAATGTTATTGGGACTGGAAGATCGGGAACCGTTTACAAAGCTGTCCTTGACGACGGCACATCACTCATGGTTAAGAGATTACAGGAATCTCAACACTCGGAGCAAGAATTTACAGCTGAGATGGCCACACTAGGAACAGTGCGACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCCTCGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACTCTTCATGACAAACTACATCCTGATGCCGGCGAGTGCACTATGGAGTGGTCAGTAAGGCTCAAAATCGCAATCGGAGCAGCCAAAGGATTCGCATGGCTTCATCACAACTGCAATCCTCGTATCATCCACCGAAACATAAGCTCAAAGTGCATCTTGTTGGACGTAGATTTCGAGCCCAAAATTTCCGATTTTGGCCTTGCAAGATTGATGAACCCAATCGATACCCATTTGAGTACTTTTGTTAATGGTGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTATACAACAACTTTGGTGGCTACACCTAAAGGGGATGTTTATAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACAGGTGAAAGACCTACACATATAGCAAAAGCTCCGGAAACTTTTAAAGGAAATTTGGTGGAATGGATTATGCAGCTTTCAGTCAACTCTAAACTAAAAGACGCTATCGATGAATCACTAGTTGGAAAAGGCGTTGATCATGAACTTTTTCAGTTTCTAAAGGTTGCATGTAATTGTGTTTCATCAACTCCAAAGGAGAGGCCTACTATGTTTGAAGTATACCAGTTTCTAAGAGACATTGGGAGTAGATACAATTTCATAACTGAGGATGAGATAATGATACTTACAGATACTGGTGATGCTGGTAAGTTGGAAGAACTTATCGTAGCGCGAGGACAGAATTGA 1842 0.4061 MDLSSRIFSAPVIVSCFLLIICGMTYGTDTDILCLRRVKESLKDPNNYLQNWDFNNKTEGSICKFTGVECWHPDENRVLNLKLSNMGLKGEFPRGIQNCSSLTGLDFSLNSLSKTIPNDISMLVTFVTTLDLSSNDFIGEIPVSLSNCTYLNSLKLDQNQFTGQIPLQLATLTRLKTFSVSNNLLSGPVPNFKQGIVTANSYANNSALCGGPLERCQVKSSKTNTAVIAGAAVGGVTLAALGVGVGLLFFVRSVSHRKKEEDPEGNKWARILKGTKKIKVSMFEKSISKMNLSDLMKATNNFSKSNVIGTGRSGTVYKAVLDDGTSLMVKRLQESQHSEQEFTAEMATLGTVRHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDKLHPDAGECTMEWSVRLKIAIGAAKGFAWLHHNCNPRIIHRNISSKCILLDVDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTTTLVATPKGDVYSFGTVLLELVTGERPTHIAKAPETFKGNLVEWIMQLSVNSKLKDAIDESLVGKGVDHELFQFLKVACNCVSSTPKERPTMFEVYQFLRDIGSRYNFITEDEIMILTDTGDAGKLEELIVARGQN* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2894 613 PANTHER LRR RECEPTOR-LIKE KINASE 5 590 - -
Mal3g2894 613 Pfam Protein tyrosine and serine/threonine kinase 305 576 IPR001245 GO:0004672|GO:0006468
Mal3g2894 613 SUPERFAMILY L domain-like 30 196 - -
Mal3g2894 613 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2894 613 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Mal3g2894 613 Gene3D Transferase(Phosphotransferase) domain 1 377 595 - -
Mal3g2894 613 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Mal3g2894 613 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Mal3g2894 613 CDD STKc_IRAK 308 579 - -
Mal3g2894 613 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Mal3g2894 613 PANTHER RECEPTOR-LIKE PROTEIN 55 5 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2894 Mal-Chr3 103181946 103184589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2894 16 590 Receptor kinase-like Gene Family AT3G28450 45.111 6.19e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mal3g2894 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2894 - - gmx:100817267 961.829