Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2891 ATGGAGGATTCATTGGAGAATTTGATTTCTTATATGGAAATGGAAGATGATATCTTGAATCAAAGTAGCACCACAACATTTGATGAGCAAGAGTTTCTCAAAGACATCATCCTTGAGGAACCAGAATGTGAACCCTCTTCTTATCTTTGTTCCAATAAAATCCAAGACAATAGTACAAATACTGCTGGCATAATTAATGTTGAACGTAATGCCACTAGCCCCACAAATAGCATTTTGTCCTTTGATGAGACAAGCTTGTCATGTGGTGAAACAATCCACAAAAGTAATAGCTCCAACTCAATCAAGTCTTTGGAAAAATCATGTGTTTGTTCTCCAGCCACATACCTTTTATCTTTTGATAAATCAAGTGTTGAACCAATCATTGAACCAATGTCACATAAAAGAAGGAGTTTTGTAGGGAAAGATGAACAAACAAGGGTGAAGGAAGTAACAAAGAAGGTTAGAAGGTCATGTGAGACAGTACAAGATCACTTAATGGCTGAGAGGAAAAGGAGAAGGGAATTAACAGAGAGTATCATAGCACTTTCAGCCATGATACCTGGCTTGAAAAAGATAGACAAATGTTATGTGCTTAGTGAAGCTGTGAATTACACAAAACAGCTTCAAAAGCGCATTAAAGAATTGGAGAATCAAAACAAAGATAACAAAGCAAATCCAGCAATATTCAAGTGGAAATCTAAAGCTTCATCAAATAAAAAGAAGTCCTCAGAAGAATCACTGCTCGAGGTTGAAGCTAGAGTCAAAGAAAAGGAAGTACTCATTAGAATTCATTGTAAGAAGCAAAAGGACATAGTGCTCAAAATACATGAATTGCTTGAAAAGTTCAATCTCACTATAACCACTAGTAGCATATTACCATTTGGTGCTTCTATTCTTGTAATCAACATTTTTGCTCAGATGGATGAAGAAGACAGCATGACCATGGATGGCCTTGTGGAAAATCTAAGAAAATATCTATTGGAGGCACATGAGAGTCAGTTGTGA 1005 0.3622 MEDSLENLISYMEMEDDILNQSSTTTFDEQEFLKDIILEEPECEPSSYLCSNKIQDNSTNTAGIINVERNATSPTNSILSFDETSLSCGETIHKSNSSNSIKSLEKSCVCSPATYLLSFDKSSVEPIIEPMSHKRRSFVGKDEQTRVKEVTKKVRRSCETVQDHLMAERKRRRELTESIIALSAMIPGLKKIDKCYVLSEAVNYTKQLQKRIKELENQNKDNKANPAIFKWKSKASSNKKKSSEESLLEVEARVKEKEVLIRIHCKKQKDIVLKIHELLEKFNLTITTSSILPFGASILVINIFAQMDEEDSMTMDGLVENLRKYLLEAHESQL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2891 334 PANTHER BHLH TRANSCRIPTION FACTOR 4 332 - -
Mal3g2891 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 223 IPR036638 GO:0046983
Mal3g2891 334 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 332 - -
Mal3g2891 334 Gene3D - 147 225 IPR036638 GO:0046983
Mal3g2891 334 Pfam Helix-loop-helix DNA-binding domain 163 209 IPR011598 GO:0046983
Mal3g2891 334 SMART finulus 165 214 IPR011598 GO:0046983
Mal3g2891 334 Coils Coil 198 225 - -
Mal3g2891 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 208 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2891 Mal-Chr3 103164710 103167372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2891 114 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.771 6.08e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g2891 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2891 - - aprc:113863851 328.561