Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2873 ATGCACAACTTCATTGCTGATGTTGTTAGTCTGATTTTTGTTCCTTGCTCATCTACTCGATCTGGAATCGCACAAGAAACACAATTCAGATCTGATTCCCGATCTAAAGTGGTAGTTCGAAATGGTGTAGAGGTTGAAGATTGTTTGATTTTCCCATCTCAAACACTACAGTCTGATTCAAATTTCGACGAAGAAGATTCAACTGAGGGATTGGAAGATTTGTCCTTGTCTGAGGATGTTAGTGATGCTGAAAATGTGGGTAACGAGAATGAAGGTGAAATACCAGAAGAAGGTAACGAAGGCAGTACAAATGAGGTTGTTAGTGATGATGAAAATGTGGGGAATGAGAATGAAGCTGAAATAGCAGGGGGAAGCAAGGAAAAGCAAAGTGATGAGAAAAAAAAAAGTGGGGAACTAACACAACAAACATTTGTTTGTTATCGCCAAGGGTATACTGAAGAAAAAAGTAGATCAACAACTCGAAAGCGTGTACGGAAAGCTCGTGTTAGATGTGGTTGTGAAGCAAAATGTCGTGTTCACATTGAAGCTAATACTGGAAGGTGGTACATGAAACTTATGCATGATGCTCATAATCATAGTTTGTTAGATGATCAATTCACTGCTATGCTCCCGGCACACAGGAAGATGTCAGAATTTGACATTTGGCGTATGAGGAACATGAGGCAAGTTGGGATTAAGACCACTCACATATTTGGATTGTTTGCCAATGAAGCTGGTGGTTATGGAAAGGTTGGATTTCGTAAGCGTGATATGTACAATGAACAAGAAAGGTTGCGACTAACCTCATATGTCGATGCAAAAGCTGCTTGTGGCGTGACTATATCACAGATAAGTGTCTATTGCCCAAATTCCAACAATTTCAACCCATCTTCCAAAGTAAACACTCCCTCTTTTGAAGAGGCAGCTGATGGAGGTTTGATTGTAGTTACAATACACGCATTTAACCAAGGGCAAGGAAAGTACACCATCAATCCACCCGTATGTCTCATGTTCAGAGGAGAACAGAAAAAGACCAAGAATAACATATATCTAATATGGGAAGAGGTTCAACTTAGAGCAAAGGAGTCTCCTACCAATGATGATGTATTAAATGTGGAGGTGGTTCAGGTCACACAAGGAAAGGAATCATCGGGTTTTGTCAACATCCATCTTGGGAATGTTGTTTCCAAAATGAGCATTAGTAAGAAGTACCAGCTTAAAAACTCCAAAAATGGTTGGATCCAGATAGAGTTGCTCTGGAGAACTTCATAG 1272 0.4002 MHNFIADVVSLIFVPCSSTRSGIAQETQFRSDSRSKVVVRNGVEVEDCLIFPSQTLQSDSNFDEEDSTEGLEDLSLSEDVSDAENVGNENEGEIPEEGNEGSTNEVVSDDENVGNENEAEIAGGSKEKQSDEKKKSGELTQQTFVCYRQGYTEEKSRSTTRKRVRKARVRCGCEAKCRVHIEANTGRWYMKLMHDAHNHSLLDDQFTAMLPAHRKMSEFDIWRMRNMRQVGIKTTHIFGLFANEAGGYGKVGFRKRDMYNEQERLRLTSYVDAKAACGVTISQISVYCPNSNNFNPSSKVNTPSFEEAADGGLIVVTIHAFNQGQGKYTINPPVCLMFRGEQKKTKNNIYLIWEEVQLRAKESPTNDDVLNVEVVQVTQGKESSGFVNIHLGNVVSKMSISKKYQLKNSKNGWIQIELLWRTS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2873 423 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 303 423 IPR045050 GO:0008289
Mal3g2873 423 PANTHER SYNAPTOTAGMIN-2 303 423 - -
Mal3g2873 423 Pfam FAR1 DNA-binding domain 127 202 IPR004330 -
Mal3g2873 423 Gene3D C2 domain 313 422 IPR035892 -
Mal3g2873 423 MobiDBLite consensus disorder prediction 56 137 - -
Mal3g2873 423 MobiDBLite consensus disorder prediction 62 98 - -
Mal3g2873 423 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2873 Mal-Chr3 103002031 103007142 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g2873 FAR1 9.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2873 - - mtr:MTR_7g080570 141.739