Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2840 ATGGAACAAAACAATAACATCAACGGTAACAATAGCAATGAAAACAAAAATGATGGTGGTGAAATCAATGTTTCTGATTCAAAGGGAGGAGGAAACTTTTTTGATTTTGCACCAAAAAGAAGCATAGCTGAGAGAAGGGGTTTCAATAAAATCAACACAGGAGGACTTATTCGTTTTGTCACTCAAATTTATGAAATTGAAAATTTGTTCTTGAAGTTGAAGGCCATACCATCACCCACAACAGGTAGTTTCGCCATGCTTCCACCTCTCACTGATGAAGGGCCAATGCTCAATTCTGTCACACATAAACAACTGAATGTGGATGTGCCTACTGCCTCTAATATTGCTGCCTCTTTAAATTTCAAGCATCAAGCCAATTTGGATGCTGATTCTTTATCTCCCTATTTTGCTTCTCTAAATCAGGTTTCTAATAATTGCCACATGCTGAATGGAGGACATAGAGACAGCCAAATGCTTGTTCACGGTCAACAACTGTTAGATTTTTCATTCCCAGAAGATTTTTCAAATGACTATTTAGCTAGAAATAGTGGAGTCCATTTCTACAATGATGAGAAAATGGTAGATGATATGATTGTCGACACCAATAATGTTGACATACCAATATCTCGTTCTGAAGAAGCTAGCGATGAAAGCACTCTGCCTGAAAATTCTATCCACAGCGAGGATATCGGACGACAACATGTGTTAGAAGCTGAACAGAAAGAGATGTCTCATGCAACAGGATCAAAGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAAGTAAAAGGTAGTGAATATCCGAGAAGCTACTATAAATGTACTCAGTCTAAATGTCAGGTCAAGAAAAAAGTGGAAAGGTCACATGATGGCCAAATAACAGAAATTATTTACAAGGGTAATCATAACCATGCGAAACCACATTCAGGTCGTCGAGGGTCAGTACCTTCTAGTGATGAGATGTCAGAAACTGCTGAAGCCAATGAGACATGTGATAGAGTTGATGCTGATTCTGTATGGGGGAATATCCAGCCGCGAGGAAAAGATGCAAAACACAATCCGGAGTGGAAGCCTGATGGTCAAGAAAGGACATCCCCGCCTTCTGCTGTAACCGAGCATTCAGATCCTACGAAGAGAGGTAGATCTCTAGGTATGTTTGAATCAGACGACGCTCCGGAGCATTCTTCCGCACTTGCTAATCATGGTGATAATAATGGAGCCACTCAAGCAGTCTTATCACCCGAAAACAATGCTGAAGATGCTGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGCTGAAACAATGGTGCATACAAGGGCTGTTCGTGAGCCGCGGGTGGTAGTCCAAATTGAGAGTGAAATTGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAAAAGGTGGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACCAGTGCTGGATGTACTGTAAGGAAACATGTGGAGAGGGCTTCACACAATCTAAAATTTGTTATTACAACTTATGAGGGAAAACACAACCATGAGGTTCCCGCTGCTAGAAATAACAATCAGATAAACTCAAGTGATGTTGGTTTATCTTCCAATGGTGCTAATGTGTTACCCGGGAATGCCATTATCCCAAAGTCTGAAATTCATCAAACTCTTCCATCTCATTTTGATAGAAAACCTGATTTTAGCAATGATTTTCTGAGGTCAAGTTTGATGGGAAGTTTCAGTAATGACATGGGGTATGGATCTTCCTCCACATCTCAAATGAGGTACTCTTCCTTGAATAATATCATACCTTATGGTGCCTACGGAACGAGTCCTGACCTTGGTGCTGCGCCTCAAACCGGACCTGTTGCTTCAATGTTCCCTGAATATCCAATGCCGCTGCCATTGAATCTTCCCTCATCTGGAAATTTTTCTCTAGCTGGAATTAATTTTAACTATGCAAGACCTATGAGTTCTGTCCAGTCTTACCTTTCAGGGCAGCATTTGAGGGATATCGATACAGGATTCTTAAGGCCTAAACAGGAGCTCAACGATGAATCTTTATATGCTGCATGTGCACCGTCTCTTGATCATGCAAGTTCTTCACTCACTCCACCATCAGCATCACCTTCACAATCCATTTATCAAAGTGTCATGCAAAATTTCCCTTCATAA 2190 0.4114 MEQNNNINGNNSNENKNDGGEINVSDSKGGGNFFDFAPKRSIAERRGFNKINTGGLIRFVTQIYEIENLFLKLKAIPSPTTGSFAMLPPLTDEGPMLNSVTHKQLNVDVPTASNIAASLNFKHQANLDADSLSPYFASLNQVSNNCHMLNGGHRDSQMLVHGQQLLDFSFPEDFSNDYLARNSGVHFYNDEKMVDDMIVDTNNVDIPISRSEEASDESTLPENSIHSEDIGRQHVLEAEQKEMSHATGSKTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQSKCQVKKKVERSHDGQITEIIYKGNHNHAKPHSGRRGSVPSSDEMSETAEANETCDRVDADSVWGNIQPRGKDAKHNPEWKPDGQERTSPPSAVTEHSDPTKRGRSLGMFESDDAPEHSSALANHGDNNGATQAVLSPENNAEDADSESKRRKKESYPAETMVHTRAVREPRVVVQIESEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVITTYEGKHNHEVPAARNNNQINSSDVGLSSNGANVLPGNAIIPKSEIHQTLPSHFDRKPDFSNDFLRSSLMGSFSNDMGYGSSSTSQMRYSSLNNIIPYGAYGTSPDLGAAPQTGPVASMFPEYPMPLPLNLPSSGNFSLAGINFNYARPMSSVQSYLSGQHLRDIDTGFLRPKQELNDESLYAACAPSLDHASSSLTPPSASPSQSIYQSVMQNFPS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2840 729 SUPERFAMILY WRKY DNA-binding domain 457 524 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 MobiDBLite consensus disorder prediction 423 442 - -
Mal3g2840 729 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 698 IPR044810 GO:0003700
Mal3g2840 729 MobiDBLite consensus disorder prediction 378 392 - -
Mal3g2840 729 ProSiteProfiles WRKY domain profile. 247 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 ProSiteProfiles WRKY domain profile. 459 524 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 74 698 - -
Mal3g2840 729 Gene3D WRKY domain 238 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 SUPERFAMILY WRKY DNA-binding domain 249 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 MobiDBLite consensus disorder prediction 1 26 - -
Mal3g2840 729 Pfam WRKY DNA -binding domain 253 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 Pfam WRKY DNA -binding domain 465 522 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 SMART WRKY_cls 464 523 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 SMART WRKY_cls 252 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 MobiDBLite consensus disorder prediction 302 442 - -
Mal3g2840 729 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g2840 729 Gene3D WRKY domain 451 517 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2840 729 MobiDBLite consensus disorder prediction 402 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2840 Mal-Chr3 102636814 102640933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2840 248 527 WRKY Transcription Factor Family AT5G56270 53.401 9.55e-85 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g2840 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2840 K18835 - gmx:100800211 823.157