Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2831 ATGGAATACGATGCCATCCCTCAAGAGGCAATGTGGCAAATGAATTTGAGGCCAAGTGAAACAATGGAATCAGGACCTTATCCTGAGCATCCAGGAGAACCAGATTGTTCATATTACATCAGAACCGGCCTTTGTAGATTTGGAGCAACATGTCGATTTAATCATCCTCCTAACAGGAAGCTGGCTATTGCCACTGCACGGATGAAAGGCGAGTTCCCAGAAAGGTTAGGGCAGCCAGAATGTCAGTACTATCTGAAAACAGGAACTTGCAAATTTGGAGCCACATGCAGGTTTCATCATCCTAAAGACAAGGCTGGGGTTGCTGGAAGAGTTGCCTTGAATATTTTAGGCTATCCACTCCGCCCAAATGAGTCTGAATGTGCTTATTATTTAAGAACTGGTCAATGCAAATTTGGGAACACTTGTAAATTTCACCATCCTCAACCAAGTAATATGGTACTTCCAATGGGGGGTTCTTCTGTTTATCCTACTGTCCAGTCTCCAACTACACCAGGTCAGCAGTCATATGCGGCAGGAATTACAAATTGGTCTACTTCTTCCTATATTCCTAGTCCAAGGTGGCAAGGCCCTTCAAGTTATGCACCTTTAATTCTACCTCAAGGAGTGGTTTCAGTGCCTGGGTGGGGTACATACAATGGTCAAATGGGATCAGACAATCCACAACAAACAATGAGAAATGATCAAACCTATGGAACTTCTCACCAAGGTGATCCAGAAAATGCAGGACTCCAAGGGGCTTATTCTCAATACCGTTCTGGCTCTGTTCCAGTAGGATTCTATGCTTTGCAAAGGGAGAACATTTTTCCAGAGAGACCTGATCAGCCCGAATGCCAATTCTACATGAAGACTGGGGATTGCAAGTTCGGTGCAGTCTGTCGTTTTCACCATCCACGCGAGAGGAAGATTCCTGCCCCAGATTGTGTTTTGAGTCCCCTTGGCCTTCCTTTGCGTCCTGGAGAACCACTCTGTGTCTTCTATTCGCGGTATGGCATATGCAAATTTGGCCCAAGCTGCAAGTTTGATCACCCAATGGGAATCTTCACCTATAATGTATCCGCACCACCTTTAGCTGATGCCGCAGGACGGCGTCTGCTAGGTTCTTCATCAGGAACTGCTGCATTAAGTTTATCATCAGAAGGACTTGTTGAGTCGGGCTCAGCAAAGCCAAGGAGGCTTTCATTATCAGAGACTAGACCGATTCCTTCCGGTGATGATAACATTGATGATGAGGGATAA 1257 0.4558 MEYDAIPQEAMWQMNLRPSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESECAYYLRTGQCKFGNTCKFHHPQPSNMVLPMGGSSVYPTVQSPTTPGQQSYAAGITNWSTSSYIPSPRWQGPSSYAPLILPQGVVSVPGWGTYNGQMGSDNPQQTMRNDQTYGTSHQGDPENAGLQGAYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERKIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNVSAPPLADAAGRRLLGSSSGTAALSLSSEGLVESGSAKPRRLSLSETRPIPSGDDNIDDEG* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2831 418 SUPERFAMILY CCCH zinc finger 281 306 IPR036855 GO:0046872
Mal3g2831 418 ProSiteProfiles Zinc finger C3H1-type profile. 31 58 IPR000571 GO:0046872
Mal3g2831 418 SMART c3hfinal6 278 305 IPR000571 GO:0046872
Mal3g2831 418 SMART c3hfinal6 75 102 IPR000571 GO:0046872
Mal3g2831 418 SMART c3hfinal6 30 57 IPR000571 GO:0046872
Mal3g2831 418 SMART c3hfinal6 121 148 IPR000571 GO:0046872
Mal3g2831 418 SMART c3hfinal6 324 351 IPR000571 GO:0046872
Mal3g2831 418 ProSiteProfiles Zinc finger C3H1-type profile. 278 306 IPR000571 GO:0046872
Mal3g2831 418 MobiDBLite consensus disorder prediction 227 246 - -
Mal3g2831 418 SUPERFAMILY CCCH zinc finger 79 104 IPR036855 GO:0046872
Mal3g2831 418 PANTHER PROTEIN PHOSPHATASE RELATED 5 417 - -
Mal3g2831 418 SUPERFAMILY CCCH zinc finger 122 149 IPR036855 GO:0046872
Mal3g2831 418 Gene3D - 270 352 - -
Mal3g2831 418 ProSiteProfiles Zinc finger C3H1-type profile. 324 352 IPR000571 GO:0046872
Mal3g2831 418 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 77 102 IPR000571 GO:0046872
Mal3g2831 418 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 32 57 IPR000571 GO:0046872
Mal3g2831 418 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 280 305 IPR000571 GO:0046872
Mal3g2831 418 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 326 351 IPR000571 GO:0046872
Mal3g2831 418 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 124 148 IPR000571 GO:0046872
Mal3g2831 418 MobiDBLite consensus disorder prediction 383 418 - -
Mal3g2831 418 SUPERFAMILY CCCH zinc finger 327 351 IPR036855 GO:0046872
Mal3g2831 418 MobiDBLite consensus disorder prediction 227 250 - -
Mal3g2831 418 ProSiteProfiles Zinc finger C3H1-type profile. 75 103 IPR000571 GO:0046872
Mal3g2831 418 SUPERFAMILY CCCH zinc finger 35 58 IPR036855 GO:0046872
Mal3g2831 418 ProSiteProfiles Zinc finger C3H1-type profile. 121 149 IPR000571 GO:0046872
Mal3g2831 418 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED 5 417 - -
Mal3g2831 418 Gene3D - 29 107 - -
Mal3g2831 418 Gene3D - 108 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2831 Mal-Chr3 102539501 102545810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2831 11 416 C2H2 Transcription Factor Family AT3G02830 61.446 3.76e-176 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal3g2831 zf-CCCH 5e-09 CL0537