Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2807 ATGAAGTTTCTTTACATTTACATTCTCTCCACAATTCTTCTCTTATGTATGTTACCTCACTCAATCAACTGCCAACAATTATTACTTAACACCACTGTCACTGATTGCTCAAGCAACCCTTCAGCACCAAAGGGATACCTATGCAATAGTCCTCAAAACTCATGCAATTCATTCTTAACTTTCAGGTCAAAACCTCCTTATGATAACCCTGTAAGTATTGCTTACCTTCTTGGTTCTGAAGCATCAACCATAGCCTCAATCAACAACATCTCAAGAGATACCAAGCTTCCTTCCAATAAAACAATCATTGTACCTATCTTGTGTTCATGTTCTGGAAATATCTACCAACATAACACTCCTTACACTGTCAAAAAAGGTGATACATACTTTCAATTGGTAAATGAAACTTACCAAAGCCTCACAACATGTCAGGCTTTGAAGGGTCAGAATTACTATGCTTCTGAAAACATTGCAATTGGTGCTGAGCTAACAGTTCCAGTACTTTGTGCTTGTCCTACAACAAATCAAATGGCGAAAGGGGTCACCTCTTTGCTGGTTTACACAGTGAACTATGGTGAAACTGTTAAGTCTATAGGTGAGGCTTATGGTGTTGATGAGCAAAGCATTTTAGAGGCAAATGAATTGCAAGTGGCACCAAACAGAAGTGTGATTCTCTTTGCATTGACACCAATATTAGTTCCTCTTAGAGGTAAGAGTTGCAAAGAGGACCCTGATAGTTTCTACTGTACTTGTTCTCAGGGAAGGCTTGCAGATGGAAGCTGTAATGAGTCTCATGGTCAAAAGTTTCCTACCAAATTGGTTGTTGCATTAGGTGTTGGCATTGGTGCAGGCTTTCTGGTTTTGTTTCTGTTGGGTTACAGGTTATACCAATACATAAAGAAAAGGAGAGCCAGTATTCGTAAAGAGAGGTTATTCAGGCAAAACGGTGGCTACTTATTACAAGAGAAGTTATCATCTAATGGAAATGGAGAAATGGCAAAGCTTTTTACTGCGGAGGAGCTGCAAAGAGCAACAGATAACTTCAACCAAAGTAGATTTCTTGGTCAAGGCGGCTTTGGCACAGTGTACAAAGGAATGCTACCAGATGGAACCATAGTCGCAGTTAAAAAGTCGAAACAACTAGACAGGAACCAAATAGAAACTTTTGTCAATGAAGTAGTCATCTTATCTCAGATCAACCATAGGAACATTGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACTCCATTACTAGTCTATGAATACATTCACAACGGAACTCTTTCCCAGCATATCCATAGGAAAGACCATGAGTCCCTTTCATGGGAAAGCCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTTCGGCTTCTATTCCGATCTTCCACAGAGACATAAAACCAAGTAACATACTCCTAGACAGTAACTATAATGCCAAAGTGTCTGATTTTGGAACATCTAGATCAATTCCATTAGAAAAGACGCATTTAACCACAGCTGTAGGAGGTACTTTTGGGTACATGGATCCTGAATATTTTCAGTCAAGTCAATTTACAGATAAGAGTGATGTATATAGTTTTGGTGTTGTGCTTGTAGAGCTTATAACCGGTAGAAAGCCGATAATATTCAATGATGAAGATGAGGGTCAGAATATGACTGCACATTTCATTTCAGCGATGAAGGAAAACCAACTTTCTCAAATTTTAGATGACACGGTGGTTAAGGAAGGAAAGAAAGATGACATTCATGCTATTGCAAATCTTGCAATGAGATGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAAAGAGGTTTCAACAGAATTAGAAGCACTAAGAAAGGTACAGAGTTCCTTACATATCAAAGATGATCAAGAATCACCAAGTGATGAACAATCACTTAAGCATACAACTAATGATAATTTTCATGAGTCTACCGTGGAAAGCTTTTCGCTATCCTCGCAAATGGAGTCCACATTCTTCTAA 2010 0.3871 MKFLYIYILSTILLLCMLPHSINCQQLLLNTTVTDCSSNPSAPKGYLCNSPQNSCNSFLTFRSKPPYDNPVSIAYLLGSEASTIASINNISRDTKLPSNKTIIVPILCSCSGNIYQHNTPYTVKKGDTYFQLVNETYQSLTTCQALKGQNYYASENIAIGAELTVPVLCACPTTNQMAKGVTSLLVYTVNYGETVKSIGEAYGVDEQSILEANELQVAPNRSVILFALTPILVPLRGKSCKEDPDSFYCTCSQGRLADGSCNESHGQKFPTKLVVALGVGIGAGFLVLFLLGYRLYQYIKKRRASIRKERLFRQNGGYLLQEKLSSNGNGEMAKLFTAEELQRATDNFNQSRFLGQGGFGTVYKGMLPDGTIVAVKKSKQLDRNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIHNGTLSQHIHRKDHESLSWESRLRIACEVAGAVAYMHFSASIPIFHRDIKPSNILLDSNYNAKVSDFGTSRSIPLEKTHLTTAVGGTFGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPIIFNDEDEGQNMTAHFISAMKENQLSQILDDTVVKEGKKDDIHAIANLAMRCLRLNGKKRPTMKEVSTELEALRKVQSSLHIKDDQESPSDEQSLKHTTNDNFHESTVESFSLSSQMESTFF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2807 669 Gene3D LysM domain 173 243 IPR036779 -
Mal3g2807 669 Gene3D Transferase(Phosphotransferase) domain 1 424 645 - -
Mal3g2807 669 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
Mal3g2807 669 Pfam Protein kinase domain 349 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2807 669 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 653 IPR045274 GO:0007166
Mal3g2807 669 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2807 669 MobiDBLite consensus disorder prediction 651 669 - -
Mal3g2807 669 MobiDBLite consensus disorder prediction 626 669 - -
Mal3g2807 669 PANTHER LYSM TYPE RECEPTOR KINASE 25 653 - -
Mal3g2807 669 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Mal3g2807 669 SUPERFAMILY Protein kinase-like (PK-like) 332 617 IPR011009 -
Mal3g2807 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mal3g2807 669 MobiDBLite consensus disorder prediction 626 650 - -
Mal3g2807 669 SMART LysM_2 66 105 IPR018392 -
Mal3g2807 669 SMART LysM_2 120 166 IPR018392 -
Mal3g2807 669 SMART LysM_2 186 234 IPR018392 -
Mal3g2807 669 Pfam LysM domain 121 166 IPR018392 -
Mal3g2807 669 Pfam LysM domain 187 216 IPR018392 -
Mal3g2807 669 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2807 669 CDD STKc_IRAK 354 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2807 Mal-Chr3 102220655 102223184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2807 270 642 Receptor kinase-like Gene Family AT1G16120 57.333 2.49e-144 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal3g2807 Pkinase 1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2807 - - mtr:MTR_7g079350 1186.79