Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2806 ATGGAACTTCACAACTACATTCTTCACCTCACAGTTCTGTTCCTATGCATGTTTCCTCTGTCACTCAACTGCCAACAAATATACCTCAATACCACTGTCTTTGACTGCTCTAATAGCCCTTCTGTACCAAAAGGTTACCTATGCAATGGCCTTAAAAAATCATGCACTTCCTTTTTAGTTTTCAAGTCAAAACATCCTTATGATAACCCTACAAGCATTGCTTACCTTCTTGGTTCCGAAGCATCTACCGTAGCCTCAATCAATAAGATATCAATAAATGAGAAAATTCCTTTGAATAAGTCAATCATTGTCCCGGTCTCTTGTTCGTGTGCTGGAAATATCTACCAGCATAGCACATCTTACTCTGTCAAGCAGAATGATACTTACTATGAGCTGGTAAAAGAAACTTACCAAGGCCTCACAACCTGTCAGGCAATGATGGGTCAGAACTACTATGCTCCAATCTATATTGCAGTTGATGCTGTGCTCACAGTTCCAGTACTATGTGCTTGTCCCACAGAAAACCTGAAGGCAAAAGGGGTTACTTCCTTACTAGTTCACATCGTGAACTATGGTGACACGGTTAAGTCCATAGGAGGGAGTTATGGTGTTGATGAACATAGTATGCGTGAGGCCAATGAGTTGCCGGTGCTACAGAGTCCAAACAGCAGTGTTATCCTCTTTGCATCGACGCCTATACTAGTTCCTCTGAGAGGCGAGAATTGTAAAGAGAACTCAGATAGATTCTATTGCAAATGTTCCGAGGCACTACGTGCAGATGGAAGCTCCAAGGGGATCTATTGTGATGAATCTCCTAGACGAAAAGTTCCTGGAAAATTGATTGCTGCCTCAGGTATGGGAATTGGTACAGGCTTTCTGTGTTTGTTTCTTTTGAGTTACAAATCATATCAATGCATAAAGGAAAAGAGAGAAAGAATCCGTAAGGAAAAGCTCTTCAGGCAAAACGGTGGCTACTTGTTACAAGAGAAGTTATCATCGTATGGAAATGGAGAAATGGCTAAGCTTTTTACCGCAGAGGAGCTGCAAAGAGCAACGGATAACTACAACCGGAGTAGGTTTCTTGGTCAGGGTGGATATGGTACGGTGTATAAAGGAATGTTACCAGATGGAACTATAGTCGCGGTTAAAAAGTCCAAGGAACTTGAAAGAAACCAGATAGAGACTTTTGTCAATGAAGTGGTCATCTTGTCCCAGATCAACCACAGGAATATTGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACCCCATTACTTGTGTATGAATATATTCCCAATGGAACCCTCTCCCAACATATACATAGCAAAGACCACGACTCATCGCTTTCATGGGACAATCGCCTTAGAATTGCGTGTGAAGTTGCTGGAGCAGTGGCATACATGCATTTTTCAGCCTCTATTCCAATCTTCCACAGAGACATAAAACCCACCAACATACTACTAGACAGTAATTTTAGTGCCAAAGTATCTGATTTCGGGACATCAAGATCAATACCACTAGATAAGACTCACTTAACAACATTTGTAGGTGGAACTTTCGGGTACATAGATCCTGAATATTTCCAGTCCAGTAAATTTACAGATAAAAGTGATGTGTATAGTTTTGGGGTTGTACTCGTAGAGCTCATAACTGGTCGAAAGCCTATTTCATTCTACGATGAAGATGACGGTCAGAATTTGATTGCACAGTTCATTTCAGTGATGAAGGAGAACCAAGTTTCTCAAATTATAGATGCCAGAGTGCAAAAGGAAGCAGGAAAAGACACCGTTCTTGCCATTTCAAATCTTGCAATGAGATGCTTGAGACTTAATCATAAGAAAAGACCAACAATGAAAGATGTTTCAGCAGAATTAGAAACACTGAGAAAGGCACAAAGTTCCTTTGAAATCAACCATGATCATGATTCTTCATCAAGTGATGAGGAATCATTCGGGCACGGAATTAATGAAACAACAGACCAAGAATCCACAGAGGAAAGCCTTTCACTTTCCATACAAATAGAATCCACGTCCTTCTGA 2040 0.4074 MELHNYILHLTVLFLCMFPLSLNCQQIYLNTTVFDCSNSPSVPKGYLCNGLKKSCTSFLVFKSKHPYDNPTSIAYLLGSEASTVASINKISINEKIPLNKSIIVPVSCSCAGNIYQHSTSYSVKQNDTYYELVKETYQGLTTCQAMMGQNYYAPIYIAVDAVLTVPVLCACPTENLKAKGVTSLLVHIVNYGDTVKSIGGSYGVDEHSMREANELPVLQSPNSSVILFASTPILVPLRGENCKENSDRFYCKCSEALRADGSSKGIYCDESPRRKVPGKLIAASGMGIGTGFLCLFLLSYKSYQCIKEKRERIRKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKELERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIPNGTLSQHIHSKDHDSSLSWDNRLRIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSIPLDKTHLTTFVGGTFGYIDPEYFQSSKFTDKSDVYSFGVVLVELITGRKPISFYDEDDGQNLIAQFISVMKENQVSQIIDARVQKEAGKDTVLAISNLAMRCLRLNHKKRPTMKDVSAELETLRKAQSSFEINHDHDSSSSDEESFGHGINETTDQESTEESLSLSIQIESTSF* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2806 679 Pfam Protein kinase domain 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2806 679 PANTHER LYSM TYPE RECEPTOR KINASE 25 658 - -
Mal3g2806 679 MobiDBLite consensus disorder prediction 636 679 - -
Mal3g2806 679 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Mal3g2806 679 SUPERFAMILY Protein kinase-like (PK-like) 338 625 IPR011009 -
Mal3g2806 679 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2806 679 CDD STKc_IRAK 361 628 - -
Mal3g2806 679 SMART serkin_6 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2806 679 MobiDBLite consensus disorder prediction 649 679 - -
Mal3g2806 679 Gene3D Transferase(Phosphotransferase) domain 1 431 652 - -
Mal3g2806 679 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 658 IPR045274 GO:0007166
Mal3g2806 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mal3g2806 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Mal3g2806 679 Pfam LysM domain 187 222 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2806 Mal-Chr3 102215463 102217900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2806 240 632 Receptor kinase-like Gene Family AT1G16130 52.284 4.22e-140 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal3g2806 Pkinase 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2806 - - gmx:100795455 1015.76