Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2774 ATGGAAGAAGATTGGGATCTCCATGCGGTGGTTAGAGGTTGCTCCACCACTTCCACCACCACCACAGCTACATCCTCTGTTTCTTCTTCCTCTGTTTTTCCCCTGCAACCTGAACCTTCTTGTGGCTACTCATCTATCTTTGCTAGTGAACAAAAACCTCAAATTTTGTCACTTTCTAATTCTACACACCCTTTTGAAGCAAGAAGCTCCATTGAAGAGTTGCATGAACTTTGCAAGCCTTTCTTTTCTAGATCACAGCCTCTTTCTTTGCAAACTTCTCCTCTGTTTTCTTCATTCTCTTATTCCTCTGCATCACCTAAATTAGCTCAAACACAAGACAAACAACAACTTCAAAGAAGTAAACAACCACACCAAGGTGGTTCTGTCACCAACCCAAGATCAAAAAGAAGGAAAAATCAACTTAAGAAAGTTTGTCAAGTACCAGTAGAGAGTCTCTCTTCAGATATATGGGCATGGAGAAAATATGGACAAAAACCTATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGATCCAACAATGTTCATAGTAACATATACATGTGAACACAATCACCCTGCTCCTACACACAAAAACTCTCTTGCTGGTTCAACACGCCAGAAGCCATTAACACCTCCTCAAGCTGAAATCAACAAAGATCCTACAAAACCCTCTTCTCCTGCTAGTTCAGGAGGTGAAGAAGATGTTCAAACTCAAGGAGAAAAGTCAGATAGCAGAGAAGAAAAGGAAGATTCTTTGATGGATGATGAAGAAGGAGATGAATTTGGTTTATCTGTTGTTGTTTTAAGTGATGATTTCTTTGAAAGTTTAGATGAATTGAGAGATTGTTTTACAGATCCATTTTCTTCAGCCATTGCAATTCCTAGTTGGGTGGCCAATAATAGTGCTGCTGCTACAATTGCTGGTGGTAGCTGA 993 0.3958 MEEDWDLHAVVRGCSTTSTTTTATSSVSSSSVFPLQPEPSCGYSSIFASEQKPQILSLSNSTHPFEARSSIEELHELCKPFFSRSQPLSLQTSPLFSSFSYSSASPKLAQTQDKQQLQRSKQPHQGGSVTNPRSKRRKNQLKKVCQVPVESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTCEHNHPAPTHKNSLAGSTRQKPLTPPQAEINKDPTKPSSPASSGGEEDVQTQGEKSDSREEKEDSLMDDEEGDEFGLSVVVLSDDFFESLDELRDCFTDPFSSAIAIPSWVANNSAAATIAGGS* 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2774 330 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2774 330 SUPERFAMILY WRKY DNA-binding domain 152 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2774 330 SMART WRKY_cls 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2774 330 MobiDBLite consensus disorder prediction 211 255 - -
Mal3g2774 330 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 320 - -
Mal3g2774 330 MobiDBLite consensus disorder prediction 107 134 - -
Mal3g2774 330 Gene3D WRKY domain 137 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2774 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 320 IPR044810 GO:0003700
Mal3g2774 330 ProSiteProfiles WRKY domain profile. 148 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2774 330 MobiDBLite consensus disorder prediction 211 279 - -
Mal3g2774 330 MobiDBLite consensus disorder prediction 107 144 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal3g2774 Mal-Chr3 101495093 101496318 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2774 1 329 WRKY Transcription Factor Family AT4G01250 46.552 3.57e-77 236
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g2774 WRKY 8.9e-25 CL0274
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2774 3 101495093 101496318 Mal1g2108 1 27590498 27591738 ECH
Mal3g2774 3 101495093 101496318 Mal3g2774 3 101495093 101496318 ECH
Mal5g1277 5 22333855 22335686 Mal3g2774 3 101495093 101496318 ECH
Mal7g4979 7 118728902 118730065 Mal3g2774 3 101495093 101496318 ECH
Mal3g2774 3 101495093 101496318 Mal5g1277 5 22333855 22335686 PCT