Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal3g2774 | ATGGAAGAAGATTGGGATCTCCATGCGGTGGTTAGAGGTTGCTCCACCACTTCCACCACCACCACAGCTACATCCTCTGTTTCTTCTTCCTCTGTTTTTCCCCTGCAACCTGAACCTTCTTGTGGCTACTCATCTATCTTTGCTAGTGAACAAAAACCTCAAATTTTGTCACTTTCTAATTCTACACACCCTTTTGAAGCAAGAAGCTCCATTGAAGAGTTGCATGAACTTTGCAAGCCTTTCTTTTCTAGATCACAGCCTCTTTCTTTGCAAACTTCTCCTCTGTTTTCTTCATTCTCTTATTCCTCTGCATCACCTAAATTAGCTCAAACACAAGACAAACAACAACTTCAAAGAAGTAAACAACCACACCAAGGTGGTTCTGTCACCAACCCAAGATCAAAAAGAAGGAAAAATCAACTTAAGAAAGTTTGTCAAGTACCAGTAGAGAGTCTCTCTTCAGATATATGGGCATGGAGAAAATATGGACAAAAACCTATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGATCCAACAATGTTCATAGTAACATATACATGTGAACACAATCACCCTGCTCCTACACACAAAAACTCTCTTGCTGGTTCAACACGCCAGAAGCCATTAACACCTCCTCAAGCTGAAATCAACAAAGATCCTACAAAACCCTCTTCTCCTGCTAGTTCAGGAGGTGAAGAAGATGTTCAAACTCAAGGAGAAAAGTCAGATAGCAGAGAAGAAAAGGAAGATTCTTTGATGGATGATGAAGAAGGAGATGAATTTGGTTTATCTGTTGTTGTTTTAAGTGATGATTTCTTTGAAAGTTTAGATGAATTGAGAGATTGTTTTACAGATCCATTTTCTTCAGCCATTGCAATTCCTAGTTGGGTGGCCAATAATAGTGCTGCTGCTACAATTGCTGGTGGTAGCTGA | 993 | 0.3958 | MEEDWDLHAVVRGCSTTSTTTTATSSVSSSSVFPLQPEPSCGYSSIFASEQKPQILSLSNSTHPFEARSSIEELHELCKPFFSRSQPLSLQTSPLFSSFSYSSASPKLAQTQDKQQLQRSKQPHQGGSVTNPRSKRRKNQLKKVCQVPVESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTCEHNHPAPTHKNSLAGSTRQKPLTPPQAEINKDPTKPSSPASSGGEEDVQTQGEKSDSREEKEDSLMDDEEGDEFGLSVVVLSDDFFESLDELRDCFTDPFSSAIAIPSWVANNSAAATIAGGS* | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal3g2774 | 330 | Pfam | WRKY DNA -binding domain | 155 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mal3g2774 | 330 | SUPERFAMILY | WRKY DNA-binding domain | 152 | 214 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mal3g2774 | 330 | SMART | WRKY_cls | 153 | 213 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mal3g2774 | 330 | MobiDBLite | consensus disorder prediction | 211 | 255 | - | - | |
Mal3g2774 | 330 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 320 | - | - | |
Mal3g2774 | 330 | MobiDBLite | consensus disorder prediction | 107 | 134 | - | - | |
Mal3g2774 | 330 | Gene3D | WRKY domain | 137 | 207 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mal3g2774 | 330 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 320 | IPR044810 | GO:0003700 | |
Mal3g2774 | 330 | ProSiteProfiles | WRKY domain profile. | 148 | 214 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mal3g2774 | 330 | MobiDBLite | consensus disorder prediction | 211 | 279 | - | - | |
Mal3g2774 | 330 | MobiDBLite | consensus disorder prediction | 107 | 144 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal3g2774 | Mal-Chr3 | 101495093 | 101496318 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal3g2774 | 1 | 329 | WRKY Transcription Factor Family | AT4G01250 | 46.552 | 3.57e-77 | 236 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mal3g2774 | WRKY | 8.9e-25 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mal3g2774 | 3 | 101495093 | 101496318 | Mal1g2108 | 1 | 27590498 | 27591738 | ECH | |
Mal3g2774 | 3 | 101495093 | 101496318 | Mal3g2774 | 3 | 101495093 | 101496318 | ECH | |
Mal5g1277 | 5 | 22333855 | 22335686 | Mal3g2774 | 3 | 101495093 | 101496318 | ECH | |
Mal7g4979 | 7 | 118728902 | 118730065 | Mal3g2774 | 3 | 101495093 | 101496318 | ECH | |
Mal3g2774 | 3 | 101495093 | 101496318 | Mal5g1277 | 5 | 22333855 | 22335686 | PCT |