Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2744 ATGGAAGCCTCCTCTTCTTCTCCTTGCAGTTCAAGTTCAACCACAGTGTTATGCAGCTACCATGTGTTTTTGAGTTTTAGGGGAGAAGATACGCGCAAAGGATTCACCGATCATTTATGTGCTTCCCTTGAAAGAAAAGGGATCACAACTTTCAGAGATGACAAAGATCTTGAGAGAGGACAAGTCATTTCAGAAAAGCTAATCAATGCAATAAAAGATTCTATGTTTGCTATCACTATTCTCTCACCAGATTATGCTTCCTCCACTTGGTGTTTGGATGAGCTTCAAATGATCATGGAGTGCAGCAATAACAAGGGTCTAGAAGTTTTTCCAGTCTTCTATGGTGTGGACCCATCTGATGTAAGGCATCAAAGAGGAAGCTTTGAGGATGCTTTCAGAAAACATCAAGACAAGTTTGGTCAGCACATGAGCAACAAGGTTGATAGATGGAGAGATGCACTCACACAAGTTGCCAGTTTCTCTGGATGGGATTCCAAGGGCCAGCATGAGGCATCACTAGTAGAAAACATTGCTCAACACATACATAGAAAGTTGGTTCCTAAATTGCCATCTTGTGCAGAGAACCTTGTTGGGATTTCATCAAAGGTAGAACAAGTGAACAAGCTCATAGGTATGCGATTGAACGATGTTCGTTTTATAGGCATATGGGGTATGGGGGGCATAGGTAAGTCAACTATTGCTAGAGCTGTCTATGAGGCAATCCAAGGTGAATTTCAACTGACTTGCTTTCTTTCAAATGTTAGAGAGTTATCTGAGACAAATGGTTTAGTTCACATACAAAGACAACTTCTTTCTCATTTGAGTATAAGTAGGAATGATTTTCATAATTTGTATGATGGGAAAAAGACAATACAGAACTCTTTATGCAGAAAAAAGGTTCTCCTTGTTCTTGATGATGTGCATGAATTAAACCAGTTGGAGAATTTGGCTGGGAAGCAAGATTGGTTTGGTCCAGGAAGTAGAGTAATAATCACAACTAGAGATAAGCACTTGCTAATGATACATGGAGTACATAAAACTTATGAAGTTGGAATGTTATTCCAAAATGAAGCCCTTAATCTCTTTTGTTTGAAAGCCTTTAAAGGAGATAAACCACAAGAAGGGTATTTGGATTTGTCCAAAGAAGCGGTGGATTATACTGGTGGTCTTCCATTGGCACTTGAGGTGTTAGGTTCCTATCTCTATGGAAGAAATGTTGATGTTTGGCATAGTGCTATTAAAAAAATAAGAAGTGTCCCACATCCTAGAATCCAAGATAAACTGAAAATAAGTTATGACAGTTTAGATCCAATGGAGAAGGATATTTTTCTAGATATTGCTTGTTTCTTTAAGGGAATGAAGAGAGATAAGGTAATGGATATATTAGAAAGTTGTGGTTATTGCCCTCAAATTGGCATCGAAATTTTGATTGAAAGGTCTTTGATAACTCTAGATTGGAGGAATAATAAACTGGGAATGCATGATTTGCTTCAAGAAATGGGCAGGGATATTGTATTTCAAGAATCTCCGAATGATCGTAGCAAACGTAGCAGGTTGTGGTCTCAAGAGGACATTGATCATGTGTTAACAAAAAACAAGGGAACTGAAGCAATTAAGAGCATATATATGAGATTAATTCAACCATATGAAGCACGTTGGAGCAGTGAAGCATTCTTTAAGACAAGTCAGCTAAAATATCTCAGTTTATGTGAGATGCAACTTCCCCTTGGCCTCAATTGTCTTCCTTGTTCGTTAAAAGTTCTCCACTGGAGAGGGTGTCCTTTGAAAACTCTACCTCTAACAACTCAACTGGATGAAGTTGTTGACATTAAATTATCTCATAGCAAAATTCAACAACTTTGGCATGGAATAAAGTTTATGGAAAAGCTGAAGTACTTGAATATGGCTTTTTCGAAGAGCCTAAAGAGATTACCTGATTTTTCTGGTGTTCCGAATCTTGAAAAATTGATTCTCAAAGGCTGTGAAGGCCTAACTGAGGTTCATCCATCCCTTGTACACCACAAGAAAGTTGTTTTGATAAATTTCGAAGACTGCAAAAGTCTTAAATCTCTTCCAGGGAAACTGGAGATGAGTTCTCTGGAGAAGTTAATTCTTTCTGGCTGTTGTGAATTTAAAATCCTTCCAGAGTTTGGGGAAAGCATGGAAAATTTATCAATGCTTGCGTTAGAAGGAACTGCTATAAGAAAACTACCTTCATCACTTGAATACTTAGTTGGACTTGCTAACTTGAACTTAAAGGACTGCAAAAGTCTTGTTTGCCTTCCAGATACCATTCATGGATTGAATTCACTCATAATTTTGACCATTTCTGGATGTTCAAAACTTTGTAGATTGCCGGATGGTTTAAAGGAAATCAAGTGTTTGCAGGAACTTCATGCCAATGATACTGCTATTGATGAATTACCTTCCTCCATTTTCTATCTAGATAATCTTAAAGTATTATCATTTGCTGGTTGCAAAGGGCCTTTGACAAAGTCAATGAGCTTGTTTCTTCCCTTCAATTGGATGGTTGGGAGTCAACAAGCTTCCACTGGATTCATATTTCCAACTTCTGTTTGGAATTTACCTTCTTTGACACGTATAAACTTAAGTTACTGTAATCTTTCTGAAGAATCAATCCCGGATTATTTTCGCCACTTATCATCGTTGAAGTCTTTGGATCTAACTGGTAACAATTTTGTTAACATACCAAGCACCATTTCCAAACTGCCAAGGCTGGATTTTCTTACTCTAAATTGCTGCCAAAAACTTCAACTATTGCCTGAGCTTCCATCAAGTATGACACAGTTGGATGCAAGCAATTGTGATTCACTAGAAACTTCCAAATTTAATCCAGCAAAGCCATGCAGTCTCTTTGCATCATCACCTAGACAACCGTCCTACTTTCAAAAACTTTATAAAAATTATATGGAGGAATGTTGTCTTCACAGTATCAGATGCAGACTGAATCTTAGATATTACAAAGTTTGA 2991 0.3761 MEASSSSPCSSSSTTVLCSYHVFLSFRGEDTRKGFTDHLCASLERKGITTFRDDKDLERGQVISEKLINAIKDSMFAITILSPDYASSTWCLDELQMIMECSNNKGLEVFPVFYGVDPSDVRHQRGSFEDAFRKHQDKFGQHMSNKVDRWRDALTQVASFSGWDSKGQHEASLVENIAQHIHRKLVPKLPSCAENLVGISSKVEQVNKLIGMRLNDVRFIGIWGMGGIGKSTIARAVYEAIQGEFQLTCFLSNVRELSETNGLVHIQRQLLSHLSISRNDFHNLYDGKKTIQNSLCRKKVLLVLDDVHELNQLENLAGKQDWFGPGSRVIITTRDKHLLMIHGVHKTYEVGMLFQNEALNLFCLKAFKGDKPQEGYLDLSKEAVDYTGGLPLALEVLGSYLYGRNVDVWHSAIKKIRSVPHPRIQDKLKISYDSLDPMEKDIFLDIACFFKGMKRDKVMDILESCGYCPQIGIEILIERSLITLDWRNNKLGMHDLLQEMGRDIVFQESPNDRSKRSRLWSQEDIDHVLTKNKGTEAIKSIYMRLIQPYEARWSSEAFFKTSQLKYLSLCEMQLPLGLNCLPCSLKVLHWRGCPLKTLPLTTQLDEVVDIKLSHSKIQQLWHGIKFMEKLKYLNMAFSKSLKRLPDFSGVPNLEKLILKGCEGLTEVHPSLVHHKKVVLINFEDCKSLKSLPGKLEMSSLEKLILSGCCEFKILPEFGESMENLSMLALEGTAIRKLPSSLEYLVGLANLNLKDCKSLVCLPDTIHGLNSLIILTISGCSKLCRLPDGLKEIKCLQELHANDTAIDELPSSIFYLDNLKVLSFAGCKGPLTKSMSLFLPFNWMVGSQQASTGFIFPTSVWNLPSLTRINLSYCNLSEESIPDYFRHLSSLKSLDLTGNNFVNIPSTISKLPRLDFLTLNCCQKLQLLPELPSSMTQLDASNCDSLETSKFNPAKPCSLFASSPRQPSYFQKLYKNYMEECCLHSIRCRLNLRYYKV* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2744 996 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Mal3g2744 996 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
Mal3g2744 996 Gene3D - 353 436 IPR042197 -
Mal3g2744 996 Gene3D - 184 347 IPR027417 -
Mal3g2744 996 ProSiteProfiles Leucine-rich repeat profile. 889 911 IPR001611 GO:0005515
Mal3g2744 996 SUPERFAMILY L domain-like 768 958 - -
Mal3g2744 996 Pfam TIR domain 20 198 IPR000157 GO:0007165
Mal3g2744 996 Gene3D - 13 183 IPR035897 -
Mal3g2744 996 SUPERFAMILY L domain-like 493 827 - -
Mal3g2744 996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 947 IPR044974 GO:0006952
Mal3g2744 996 SMART LRR_typ_2 862 886 IPR003591 -
Mal3g2744 996 SMART LRR_typ_2 792 815 IPR003591 -
Mal3g2744 996 SMART LRR_typ_2 887 910 IPR003591 -
Mal3g2744 996 SMART LRR_typ_2 721 744 IPR003591 -
Mal3g2744 996 Gene3D Ribonuclease Inhibitor 718 972 IPR032675 -
Mal3g2744 996 Gene3D Ribonuclease Inhibitor 550 717 IPR032675 -
Mal3g2744 996 SMART till_3 19 160 IPR000157 GO:0007165
Mal3g2744 996 Pfam NB-ARC domain 206 435 IPR002182 GO:0043531
Mal3g2744 996 PANTHER - 19 947 - -
Mal3g2744 996 PRINTS Disease resistance protein signature 219 234 - -
Mal3g2744 996 PRINTS Disease resistance protein signature 387 401 - -
Mal3g2744 996 PRINTS Disease resistance protein signature 294 308 - -
Mal3g2744 996 PRINTS Disease resistance protein signature 885 901 - -
Mal3g2744 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2744 Mal-Chr3 100882412 100886361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2744 20 824 WRKY Transcription Factor Family AT4G12020 30.545 2.87e-106 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2744 - - gmx:100815486 1333.93