Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2733 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAACATCATTTGCAAGGCACACCAGTTTATTACTATTGCCCGCCAACTTTTGAAGAGCGTGAGTCTTTAACCTCTAATGACGGTACCAGTGCTTCTCTCTCTACTGGATATCTGGTTGGCTTGAACCTGGAGGCATCCATACCTGATACATTCCGGTCTCCTCCTGTGCCTCTTCCTTATGACATTGTCTTCGGAGGTTCTGCATCACCTGATTCCGAGTCTGGCAAAGAAACTGTCAGTTTTAGTAGCTTCGGAACTTCAATTACACGTGATGATATTGAAGAATCAGATTGTAAAGCTCACGAAAAATCTGCATCTCTATCTCCAAGGAAGATAGAACTATCAAAATCAAATGGAACTCAAGTATTGGCAACAGAAGAAGAGGACGTCTGCCCGATTTGTCTGGAAGAATATGATGATGATAATCCTAAAAATCTGACAAAATGTGATCATCATTTTCACCTATGTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCCTGTCCTAATTGTGACCAGGAAATGGTATTTTGA 561 0.4171 MGGCCCSARKHHLQGTPVYYYCPPTFEERESLTSNDGTSASLSTGYLVGLNLEASIPDTFRSPPVPLPYDIVFGGSASPDSESGKETVSFSSFGTSITRDDIEESDCKAHEKSASLSPRKIELSKSNGTQVLATEEEDVCPICLEEYDDDNPKNLTKCDHHFHLCCILEWMERSDSCPNCDQEMVF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2733 186 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 186 - -
Mal3g2733 186 Pfam Ring finger domain 139 180 IPR001841 -
Mal3g2733 186 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Mal3g2733 186 SUPERFAMILY RING/U-box 134 184 - -
Mal3g2733 186 SMART ring_2 140 180 IPR001841 -
Mal3g2733 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 185 IPR013083 -
Mal3g2733 186 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2733 Mal-Chr3 100764010 100765731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2733 1 186 C3H Transcription Factor Family AT4G00335 55.914 2.78e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2733 - - gmx:100803758 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2733 3 100764010 100765731 Mal5g1329 5 23304748 23320934 PCT