Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2730 ATGTTGGGTAGTGAACAATCTTTGGATTTGTATAAGCTGTTCATGGTGGTGAAGGACAAAGGTGGTTATGATGTTGTTTGTAAGAATGAGTTGTGGGATTTGGTTGGGGAAGAATATGGGTTGGGTGTGAAAGTTGGTTCTTCGGTTAAACTTGTTTATAGTAAGTATTTGAGTAATCTAGAGACGCCGTTGAAGAATGTCGTTGATGGTGAGTTCCCAAAGTGTGATTTAGTGGGCGATAGAGTTAAATTTGGCGAGCGTTTAATGGAGTTGCAAGCGGAATTGGTGCTGGATGATTATGGTGAGGACGATGTTGGGGATGAAGTCAAGAGTGTATACGGATGTAGGAAGAAGTTGTGTGATACTAATAGAGTGAAGGTTGTGAATCCGGAGTTGAATGCGGCTGAGCTTGAAAGGGTATATGAGTACATAGATGGTAGGAAGTTGTGTGGTGCTAATAGAGTGAAGGATGTGAATGTTGAGTCTAATGCGGTGAAGAAAGTTTCGAGTGGAGGACTTGTTGACGTGCTTATGAAGGATTGTAAGACGAATGAGACTAGTCTCGGAAAGTTGGTTAACCATAATGCTGCAATGGAAATAATGGATGATGTATCCGATGCAGCAAACAGCATGCCAGGATTGTCAGATGGAAGCAAGAGTTGTGCTAATGATGATGCCAATGACAGTGGTGATGATGTCGTGATGTTGGAACCATCTAGTGTTAATAGAGAGAGCTTTGGTCGTAAGAGGAAGAGAGACTCGATATCAGAAATGCAAAGTTGGGTTACTAGAACTGCAAAGAATCCTTGTGATCCTGTGGTAGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTACGGTAATCAAGAGATCTGGAAGAAGGTTTTGTTGTTTCGAGAAGCTGCCTTTTTGAAAAAAGATTTTGGATCAGACTGTGAGAAACTAAGCTGGCTGGCTCAGAGGATGCATCCTTCCATGTATGATGACAACCTTGGGGCAAATTACAATCTTAGACAACGGATCAAACGTGACAATGGAGTTTTAGTTGGAAAATCTGCATCTATCTTGCAAAGAACACCTGATACCGAAGCCAAGAAAAAGTTACCTGACTCCTGTGTTCCAGAATCATTTCTTGATACACCTCCCACAGTGAATATCCCTCTCGGGCCAAACCATCAAGCTGAAGTGCCCGAATGGACTGGCACAACTCACCAGAGTGATTCTAAGTGGCTGGGAACCCAAATATGGCCACTAAAAACCGTAAAATCCAAACTTTTGGAAAGGGAACCTGTTGGAAAGGGAAGACAAGATTCATGCCGTTGCCCAGTACAGGGTTCTGTTGAGTGTGTCCGACTTCACATTGCTGAGAAAAGAGCTAAACTCAAGCTGGAAATAGGTGTGGCCTTTTACCAGTGGAATTTAGATAAGGTAGGCGAAGAAGTGAGGCGATTGTGGACGTCTCAAGAAGAGAAAAGGTTCAAAGATGTAGTGAAATCGAACCCTGCTTCGCTTGATAGACGTTTCTGGGACGATATTTTCAAAACATTTCCTAAGAAGAGCAGGGAAAATTTAGTCAGCTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGATACCAGAACAGGCATACTCCTGATGCCATTGACAGTGATGATGATGAATCAGAATTTACACCATTGAAGGGTGTTTTTGGACATCAAACTAATAAATCAAACAGCATCACCTTATTATCCCCTAAGAAGCCACAGACAAAAGGAATATAG 1764 0.4223 MLGSEQSLDLYKLFMVVKDKGGYDVVCKNELWDLVGEEYGLGVKVGSSVKLVYSKYLSNLETPLKNVVDGEFPKCDLVGDRVKFGERLMELQAELVLDDYGEDDVGDEVKSVYGCRKKLCDTNRVKVVNPELNAAELERVYEYIDGRKLCGANRVKDVNVESNAVKKVSSGGLVDVLMKDCKTNETSLGKLVNHNAAMEIMDDVSDAANSMPGLSDGSKSCANDDANDSGDDVVMLEPSSVNRESFGRKRKRDSISEMQSWVTRTAKNPCDPVVGSMPEKSKWKSYGNQEIWKKVLLFREAAFLKKDFGSDCEKLSWLAQRMHPSMYDDNLGANYNLRQRIKRDNGVLVGKSASILQRTPDTEAKKKLPDSCVPESFLDTPPTVNIPLGPNHQAEVPEWTGTTHQSDSKWLGTQIWPLKTVKSKLLEREPVGKGRQDSCRCPVQGSVECVRLHIAEKRAKLKLEIGVAFYQWNLDKVGEEVRRLWTSQEEKRFKDVVKSNPASLDRRFWDDIFKTFPKKSRENLVSYYFNVFLLQRRGYQNRHTPDAIDSDDDESEFTPLKGVFGHQTNKSNSITLLSPKKPQTKGI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2730 587 Pfam ARID/BRIGHT DNA binding domain 5 61 IPR001606 GO:0003677
Mal3g2730 587 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 585 - -
Mal3g2730 587 SMART ELM2_2 386 436 IPR000949 -
Mal3g2730 587 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 585 - -
Mal3g2730 587 Gene3D - 2 70 IPR036431 GO:0003677
Mal3g2730 587 CDD SANT 485 532 IPR001005 -
Mal3g2730 587 SMART bright_3 2 66 IPR001606 GO:0003677
Mal3g2730 587 CDD ARID 6 61 - -
Mal3g2730 587 SUPERFAMILY ARID-like 6 67 IPR036431 GO:0003677
Mal3g2730 587 MobiDBLite consensus disorder prediction 211 252 - -
Mal3g2730 587 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2730 Mal-Chr3 100736978 100741221 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal3g2730 ARID 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2730 - - mtr:MTR_7g078120 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2730 3 100736978 100741221 Mal5g1331 5 23369170 23374480 PCT