Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2707 ATGGCTGTGGTGAGTCCTATGCCTGCAACAATAGAAAGAACAGGTTCTGTGAGTTCGGTTCGCGATGTCGGAGGAGAAATTGAAGAGGAAACTAATCAAGCTGTGGTTGATGAGGCAATCTATGTTGCTGTGTCAAAGGATGTAAAAGAGAGTAAATTGAATTTGATTTGGGCAATACAGAATTCTGGAGGAAAGAGGATCTGTATCCTCTTTGTTCATGTGCCTGCAACAATGATCCCTTTGATGGGTGCTAAATTTCCCGCAAGTTCATTGAAAGATAAAGAAGTCCGAGCTTACCGGGATATTGAAAGGCAAAACATGCATAAAACCCTTGATGAATATCTTCGAATCTGTCAGCGGATGGGGGTGCGTGCAGAGAAATTACATATCGAAATGGAGAACATTGAAAAAGGAATTATAGAACTTATCTCTCAGTATGGAATCCGAAAGCTTATTATGGGAGCAGCATCTGATAAAAATTATTCTAGGAGAATGATGGACCTCAGATCTAGGAAAGCCATCTATGTATGTGAAAAAGCTCCAGCTTCTTGCCATGTACAGTTCATCTGCAAAGGCCACCTTATACACACAAGGGATCGCAGTTTAGATGAACAAAACACAGAGGTTGCATCTCCTTTGGTGCAGCAAGTGCCGAACTCTGTGAGACCTTTAAGATCCCAATCTATTACACTGGGGCAAAATCATAGGACAAATTCAATTAGTTCTTCTCAAGAGTTATTTCGCAGAGTGAGGCGAGGTACAGAAGTAAGTTCTGATGAGTCCGATAGGCTTTCAAGGACGAGTCCTTCAGGTTTGTCGACATTCTCCGATAGTGCAATTGAACCAGTACTGACGCCAAATTCTGTTGCCGAGAGCAGTGAGAATGCATTAGACTTGACTTTGAGTCACCTGATTAAAGACGAGGATCTTCGTCATTTATCGCCTCCAAGTGTACTGCAGGATGGTGGAGTGAACGATACAATCTATGACCAACTCGAACAGGCTATGTCTGAGGCTAATAATGCTACTCGACATGCATATCAAGAAACTTTTAGACGTGGGAAAGCTGAGAAAGATGCCATTGAAGCCATACGCAGGGCTAAAGCATCTGAAAGCTTATATACAGAAGAATTGAATCTGAGGAAAATGGTGGAAGAAGAACTAAGAAAGGAAAAAGAAGAACTTGAGAGTGTGACGAGCCAGAGAGACAAAGTAAATGAAGAACTCCAACTTGCTGTGGATCTGAAGTCATCACTAGAGAGTCAACTTGCATCGTCTGAAGTTATGATACAGGAATTGGAGCAGAAGATTATATCTGCTGTGGAGCTGTTACAAAGCTACAAGAACGAGCGAGATGAATTGCAGATGCAGCGTGATAATGCATTGAGAGAGGCTGAAGGTCTGAGGAAAAAACAAGGAGACGGCTCGAGCACTCATGTACCTCAATTGTTCTCAGAATTCTCTTTTTCAGAAATAGAAGAAGCAACGAGTAACTTTAATCCATCTCTAAAGATCGGAGAAGGTGGATATGGAAATATATATAAAGGTCTCCTCCGTCACACGGAAGTGGCTATAAAGATTTTGCATGCCAACAGCATGCAAGGACCCTTGGAGTTTCAGCAGGAGGTGGATGTATTGAGTAAGCTAAGGCATCCCAATCTGATCACTCTTATAGGAGCCTGTCCTGAATCCTGGTCTCTTGTCTATGAGTATTTGCCAAATGGAAGCCTCGAAGACCGTCTTGCCTGCAAGGATAACACACATCCATTATCATGGCAAACGCGGATTCGAATCGCTGCAGAACTCTGCTCCGCTCTCATCTTTCTTCATTCAAGTAAACCTCACAGCATAGTGCATGGTGACTTGAAGCCGTCCAATATCATCCTGGATGGAAACCTTGTCAGCAAGCTTAGTGACTTTGGAATCTGTCGCATATTATCAAATTACGAGAATTCTAGTAATAATAATACACAGTTTTGGAAAACCGATCCAAAGGGAACTTTTGTCTATATGGATCCTGAATTCCTTGCTTCCGGTGAACTCACTCCGAAATCAGATGTCTATTCATTTGGAATCATATTATTGAGATTGTTGACTGGGAGACCGGCATTGGGAATAACTAAGGAAGTGAAATATGCAGTAGATACCGGAAAGTTGACATCTTTATTGGATCCTTTGGCCGGAGACTGGCCATTTGTGCAAGCTGAACAGTTAGCTCGCTTGGGCTTGCGGTGTTGTGAGATGAATAGGAAGAGCCGTCCGGACCTTCATTCAGATGTATGGAGGATATTGGATGCAATGAGGGCTTCTTCTGGTGGTACAAACTCCTTTGGTCTAAGTTCTGAAGGGCCTCACCAACCTCCTTCATATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCGCATGTAGCTGCAGATGGTTTTACTTATGAAGCAGAGGCTATCCGAGGATGGCTTGACAGTGGTCATGACACTTCGCCGATGACGAATAGTACACTTTCACATCAGAATCTTGTCCCCAACCGCGCTCTTCGCTCAGCGATCCAAGATTGGCTTCAAAGTCACTGA 2574 0.4312 MAVVSPMPATIERTGSVSSVRDVGGEIEEETNQAVVDEAIYVAVSKDVKESKLNLIWAIQNSGGKRICILFVHVPATMIPLMGAKFPASSLKDKEVRAYRDIERQNMHKTLDEYLRICQRMGVRAEKLHIEMENIEKGIIELISQYGIRKLIMGAASDKNYSRRMMDLRSRKAIYVCEKAPASCHVQFICKGHLIHTRDRSLDEQNTEVASPLVQQVPNSVRPLRSQSITLGQNHRTNSISSSQELFRRVRRGTEVSSDESDRLSRTSPSGLSTFSDSAIEPVLTPNSVAESSENALDLTLSHLIKDEDLRHLSPPSVLQDGGVNDTIYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTEELNLRKMVEEELRKEKEELESVTSQRDKVNEELQLAVDLKSSLESQLASSEVMIQELEQKIISAVELLQSYKNERDELQMQRDNALREAEGLRKKQGDGSSTHVPQLFSEFSFSEIEEATSNFNPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNIILDGNLVSKLSDFGICRILSNYENSSNNNTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLARLGLRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSTLSHQNLVPNRALRSAIQDWLQSH* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2707 857 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 53 165 - -
Mal3g2707 857 SMART serkin_6 499 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2707 857 Coils Coil 329 349 - -
Mal3g2707 857 SUPERFAMILY RING/U-box 781 856 - -
Mal3g2707 857 SUPERFAMILY Protein kinase-like (PK-like) 474 757 IPR011009 -
Mal3g2707 857 PANTHER OS02G0152300 PROTEIN 31 856 - -
Mal3g2707 857 PANTHER U-BOX KINASE FAMILY PROTEIN 31 856 - -
Mal3g2707 857 ProSiteProfiles Protein kinase domain profile. 499 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2707 857 SMART Ubox_2 790 853 IPR003613 GO:0004842|GO:0016567
Mal3g2707 857 CDD STK_N 40 192 - -
Mal3g2707 857 MobiDBLite consensus disorder prediction 228 247 - -
Mal3g2707 857 ProSitePatterns Protein kinases ATP-binding region signature. 505 526 IPR017441 GO:0005524
Mal3g2707 857 CDD RING-Ubox_WDSUB1_like 791 832 - -
Mal3g2707 857 MobiDBLite consensus disorder prediction 228 278 - -
Mal3g2707 857 MobiDBLite consensus disorder prediction 263 278 - -
Mal3g2707 857 Gene3D Phosphorylase Kinase; domain 1 484 571 - -
Mal3g2707 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mal3g2707 857 MobiDBLite consensus disorder prediction 248 262 - -
Mal3g2707 857 Pfam Protein kinase domain 503 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2707 857 Gene3D Transferase(Phosphotransferase) domain 1 572 776 - -
Mal3g2707 857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 785 857 IPR013083 -
Mal3g2707 857 Coils Coil 374 471 - -
Mal3g2707 857 Pfam U-box domain 788 857 IPR003613 GO:0004842|GO:0016567
Mal3g2707 857 ProSiteProfiles U-box domain profile. 786 857 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2707 Mal-Chr3 100406996 100412440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2707 1 857 U-box Gene Family AT2G45910 55.671 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal3g2707 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2707 - - gmx:100807515 1354.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2707 3 100406996 100412440 Mal3g2707 3 100406996 100412440 ECH
Mal5g1353 5 24128364 24136586 Mal3g2707 3 100406996 100412440 ECH
Mal3g2707 3 100406996 100412440 Mal5g1353 5 24128364 24136586 PCT