Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2689 ATGGAGCATCCACCTTACAACGGTTCGAGAGTCAAGCTCATGATTAGCTATGATGGAATAATTCAACCTAGAGTTACTAATTTATATGACGGTCATCGATATTGCTACATCGGCGGCGACAACAAAATCATCACCGTCGATCGTAATATCAAATTGTTTAACCTCAAGGCAAAGCTTTCTACATTGATGTGTTCTAATGTTCTTTACTTCAAGTATCAACTCCCTGGTAAAGATCTTGATGCTTTGATATCGGTCTATAACGAAGAAGATTTGGATCGTATGATGTTCAAGTATGATCGTATTTGTCGCGTTTCACCAAAGCCTGTAAGGTTCAGGGTCTTCCTCTTCCTTCTCTCTGTTAACAACAACAACAACAACAACACATCTTCTAATTCTTTGACTTCCGGTATCAATCTCACACGGTTGTTGCATAATTCTGCTCATGTTCTGCGTCCTGCTACTTCGGCTCCACCTCCTTCGTTGATGATGAGTCAGGAGGAATTCCCAGCCACTTCTCCAGATTTCGCGAAGAAGGATACAATTATTAAAACTGAGATGAATGAATTTGACAAACTGCATGTCAAGAATGATGAGTTCGAAGATATTCTAACATTGTGTTTTAAGCGTTATTATCCAAAGTCTAATGTAGCTTTTCTAAGATTCTTTTTGAAGTGTAATTAA 681 0.3847 MEHPPYNGSRVKLMISYDGIIQPRVTNLYDGHRYCYIGGDNKIITVDRNIKLFNLKAKLSTLMCSNVLYFKYQLPGKDLDALISVYNEEDLDRMMFKYDRICRVSPKPVRFRVFLFLLSVNNNNNNNTSSNSLTSGINLTRLLHNSAHVLRPATSAPPPSLMMSQEEFPATSPDFAKKDTIIKTEMNEFDKLHVKNDEFEDILTLCFKRYYPKSNVAFLRFFLKCN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2689 226 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 184 - -
Mal3g2689 226 CDD PB1_UP2 14 116 - -
Mal3g2689 226 Gene3D - 34 117 - -
Mal3g2689 226 PANTHER OS05G0427100 PROTEIN-RELATED 9 184 - -
Mal3g2689 226 SMART PB1_new 29 116 IPR000270 GO:0005515
Mal3g2689 226 SUPERFAMILY CAD & PB1 domains 33 122 - -
Mal3g2689 226 Pfam PB1 domain 34 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2689 Mal-Chr3 100121430 100122110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2689 10 116 MAP Kinase Kinase Kinase AT3G46920 38.889 1.26e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2689 - - mtr:MTR_5g088590 211.075