Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2671 ATGCTATGGTTTAGCATCAAGGCTTTTACTGTCGTCACATTTGTGGATGCTACGCTGACGCTAAAAGCTGTTAGCGTCCATTTTTTGCCTTTTAGCATCCAATTTTCTGCTGAAGCTACAACCCATTTTTCTTGTAGTGGCAGTGGAAGCTTCGCCACCGTCTATTTAGCCAAACACCCCAAACACTCACCTACCTTTCCATCTCTCACCGCCGTGAAATCCTGCAATCTTCACGAGTCTTATTCTCTCCAACACGAGAAACAAATACTCGATAGTTTAGGATCATCCCCACATATTATCAAGTGTTTTGGCCAAGATCAAACTGTTGAAAACGGCAAAGAATATTATAATATTTTTTTAGAATATGCCGGTGGTGGAACTCTCTCAGATCAACTCAATAACCACGGTGGTAAGCTCCCGGAAAACCTTGTTCGTCGTTATACGAGGTCCATTGTTGAAGGACTAAAGTATATTCACAAAAAAGGTTTTGTTCATTGTGACTTGAAATTGCCTAACATTCTCGTATTCGACAATGACAATGTTAAGATTTCAGATTTCGGTCTTGCGAAAGAGATAGGGATAGAACAAAGTGAAAAGTGGCAAAACAGAGGAACTCCTATGATTATGTCACCGGAAGCTGTGAATGATAGTGTGTATGAATCGCCGGCAGATATATGGGCTCTTGGTTGCGCCAATGTGGAGATGGTTACTGGAGAACCTGCATGGAATGTGAGTGACGAGTTGATGTTGTTTATTCGAATTGGGGTTGGAGAAGAATTACCAACAATTCGAGATGAATTATCAAAAGAAGGAAAAGATTTTCTTGAAAAGTGTTTCATTAAGGATCCTTTGGGAAGATGGAGTGCAGAGATGCTTTTGAACCACCCATTTATCTCTAATGTTGAAACTGTTTCAGTTGTGAAAGAGTTGGTTGATGAGTCATCAACGCCTCCATCGTCTCCAAAAATTCACTTCAATTTTCTCATTGTATTTCTTCTAATGTTACGACATTGCCTCCTACTTCAGAGGAATGGAGTGGATCGAAAATAA 1050 0.4019 MLWFSIKAFTVVTFVDATLTLKAVSVHFLPFSIQFSAEATTHFSCSGSGSFATVYLAKHPKHSPTFPSLTAVKSCNLHESYSLQHEKQILDSLGSSPHIIKCFGQDQTVENGKEYYNIFLEYAGGGTLSDQLNNHGGKLPENLVRRYTRSIVEGLKYIHKKGFVHCDLKLPNILVFDNDNVKISDFGLAKEIGIEQSEKWQNRGTPMIMSPEAVNDSVYESPADIWALGCANVEMVTGEPAWNVSDELMLFIRIGVGEELPTIRDELSKEGKDFLEKCFIKDPLGRWSAEMLLNHPFISNVETVSVVKELVDESSTPPSSPKIHFNFLIVFLLMLRHCLLLQRNGVDRK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2671 349 CDD STKc_MAPKKK 47 298 - -
Mal3g2671 349 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 45 327 - -
Mal3g2671 349 Gene3D Transferase(Phosphotransferase) domain 1 40 328 - -
Mal3g2671 349 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2671 349 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 45 327 - -
Mal3g2671 349 SUPERFAMILY Protein kinase-like (PK-like) 47 322 IPR011009 -
Mal3g2671 349 Pfam Protein kinase domain 47 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2671 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mal3g2671 349 SMART serkin_6 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2671 Mal-Chr3 99755633 99756682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2671 47 299 MAP Kinase Kinase Kinase AT3G50310 53.077 2.54e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal3g2671 Pkinase 3.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2671 - - mtr:MTR_5g017140 500.745