Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2641 ATGGGTGTTGGTGGTAATTTCTGGGAGTTGTTGAAGCCCTATTCACGCAATGAAGGTTTTGATTTCTTGAGAAACAAGCGAGTTGCTGTGGATTTATCGTTTTGGATTGTTCAGCATAACAATGCCATCAAAACCTCTGTCAAGAAACCTCACCTCAGACTCACTTTTTTTCGTACCATAAATCTCTTTTCCAAGTTTGGAGCGTTTCCGGTGTTCGTTGTTGATGGGACTCCATCGCCGTTGAAATCAAAGGCCAGGATTGCTAGATTTTTCCGGTCTTCTGGAATTGAATCGTCTAGCTTGCCGGTTGCTGAAGAAGGTGTTTCAGCTGAGAGGAACAGTTCATTTTCAAGATGCGTTCAGGAGTGTGTGGAACTTGCTAAGCTACTTGGGATTCCTGTACTGAAGGCTAAAGGAGAGGCTGAAGCACTCTGTGCCCAATTAAATAGTGAAGGTCATGTAGATGCATGCATCACACCTGACAGTGATGCATTCCTCTTTGGGGCCAAATGCATTATAAAATCTTTCTCTCCCAATTCCAAAGAACCGTTTGAATGCTACAATATATCAGATATTGAAGCTGGGCTTGGATTGAAGCGGAAACACCTGATAGCTATCTCTCTTTTGGTTGGAAATGATCACGATTTAAGTGGTGTTCAAGGGATTGGAATTGATAGTGCTCTTCGTTTTGTTCAAGCTTTCAGTGAAGATGATATATTGAATAGATTACATGAGATAGGCAAAGGGAATGCTTTTCAAGTTCCTATCGACAGTAAATCTGAGGAAAATATCGATATTGATGGGAACTCCCCAAATACAAAACAAACTCACTGCTCATTCTGTGGGCATCCAGGCAACAAAAGAGATCATATGAAGTTTTCATGTGAATTTTGTGTCACAGATGACAATGAAGGTTGCTTGAAAAAACCAGAGGGTTTTAAATGTGATTGCAACTCTTGTTGTACGAATAGGAAACATAAGGAGCAGAAAAAGATGGAAAATTGGCACACAAAAATTTGTGACAAGATTGCAAAGGAGCCAAATTTTCCAAAGGATGAAATCATTGATATGTATTTGTGCAATGACAATGGTTACTTTTCCGCGAATGATGGCCCTCAGATCTCATGGGAAAGACCGAATATGGAGCTTCTGGTTGATTTTTTAAACTTCCATCAGAACTGGGATCCGTCATACATTCGGCGGATAATGTTTCCTATGATGTCAACCATCTTCTTGAGAGAAACGGCTACAACTACAACCGATAGTTTGCTATTTGGGCAGTTTGAGTTTAATTCTTTAAAACGGGTGAAGACGAGATATGGGTATCAGTTTTACGTTGTCAAGTGGAAACGTGCAATGGGCAATGTTACCTCTAAAACTCCGTCAAATAAATCTGGCATGCAAGAAGATGTTATAGAGCTTGATGAAACAGTGGATCTACTGGACGATTGCGATTTTCCCGAGATTATTGAAGAAGATGGATGTAGTTTTCTGTTGACAGATGAAAATATGGATCTTGTTGGGGCTGCTTTTCCAGAAGAAGTGAAAATGTTTTGGAAGGAACAGGAACTAAAGGACGCGAAACGAAAAAAGAATCCAACCTCAATATCTCAAGAAAATGAAAAGTCCTCAACATCACCAAACTCAAAAGGTGTCCAACTAAATATTACAGAGTTCTTTCCAACAACCAAAAGTAAACATAATCCAAAACATGGAGAAGAGTCATCATCAAAGAAAAATGGTAGCCCGGACAGTGGAGGCTCAAAACCAAAGAGGAAATCGTCAAGTCCTAATATTCCAAAATCTGTGAGGCGTCGCCTTTTGTTTGACTAG 1833 0.3999 MGVGGNFWELLKPYSRNEGFDFLRNKRVAVDLSFWIVQHNNAIKTSVKKPHLRLTFFRTINLFSKFGAFPVFVVDGTPSPLKSKARIARFFRSSGIESSSLPVAEEGVSAERNSSFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNSKEPFECYNISDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFSEDDILNRLHEIGKGNAFQVPIDSKSEENIDIDGNSPNTKQTHCSFCGHPGNKRDHMKFSCEFCVTDDNEGCLKKPEGFKCDCNSCCTNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPQISWERPNMELLVDFLNFHQNWDPSYIRRIMFPMMSTIFLRETATTTTDSLLFGQFEFNSLKRVKTRYGYQFYVVKWKRAMGNVTSKTPSNKSGMQEDVIELDETVDLLDDCDFPEIIEEDGCSFLLTDENMDLVGAAFPEEVKMFWKEQELKDAKRKKNPTSISQENEKSSTSPNSKGVQLNITEFFPTTKSKHNPKHGEESSSKKNGSPDSGGSKPKRKSSSPNIPKSVRRRLLFD* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2641 610 Gene3D - 198 261 - -
Mal3g2641 610 MobiDBLite consensus disorder prediction 524 610 - -
Mal3g2641 610 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Mal3g2641 610 MobiDBLite consensus disorder prediction 564 578 - -
Mal3g2641 610 SMART xpgn3 1 96 IPR006085 GO:0004518
Mal3g2641 610 CDD PIN_GEN1 2 202 - -
Mal3g2641 610 Gene3D - 3 197 - -
Mal3g2641 610 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 595 IPR006084 -
Mal3g2641 610 MobiDBLite consensus disorder prediction 537 563 - -
Mal3g2641 610 SMART xpgineu 128 198 IPR006086 GO:0004518
Mal3g2641 610 MobiDBLite consensus disorder prediction 579 601 - -
Mal3g2641 610 PANTHER FLAP ENDONUCLEASE GEN-LIKE 1 1 595 - -
Mal3g2641 610 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 413 IPR036279 -
Mal3g2641 610 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Mal3g2641 610 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Mal3g2641 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Mal3g2641 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Mal3g2641 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Mal3g2641 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Mal3g2641 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2641 Mal-Chr3 99389229 99393872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2641 16 359 Core DNA Replication Machinery Family AT5G26680 24.543 6.45e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2641 K15338 - gmx:100791251 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2641 3 99389229 99393872 Mal3g2641 3 99389229 99393872 ECH