Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2636 ATGTTGGGTTCAGGGACAAATTTGGTGACAACTGTTATTGGATTTGGCATGAGTGCCACTTTCATTGTGTTTGTTTGCACAAGAATAATTTGTGGAAGGATTAGAGGTGGTGTTGAATCTAGGATGATGTATGAGATTGAATCAAGATATGATATAGAACAGCTAGAACACCATGTTAATGACCCTGGCACTGAACCAGTTTTGATTGAAGCAATCCCTACTTTAAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGCTTGGCAGACTACAAAGAAAGAGAAATATTGCGCATCATGCCCAAATGCGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCTACCTGTCCAGTGTGCCGTCTTCCATTGAAAAACTCGTCCGAAACAAAACATGTGAGACCTGTGACATTCACCATGAGCCAACCTCTTGACGAGTCACACACATCCGAAAGGAACACAGATATTGAGAGACATGGTGAAACTACTGCTGTTAACTCAATACAACCAACTTCTGGAGAATCCGAAGCAAGGCAATGA 573 0.4084 MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRIRGGVESRMMYEIESRYDIEQLEHHVNDPGTEPVLIEAIPTLKFNQEAFSSIEDTQCVICLADYKEREILRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQPLDESHTSERNTDIERHGETTAVNSIQPTSGESEARQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2636 190 Pfam Ring finger domain 89 132 IPR001841 -
Mal3g2636 190 MobiDBLite consensus disorder prediction 152 190 - -
Mal3g2636 190 MobiDBLite consensus disorder prediction 171 190 - -
Mal3g2636 190 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Mal3g2636 190 CDD RING-H2_EL5_like 89 132 - -
Mal3g2636 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 138 IPR013083 -
Mal3g2636 190 PANTHER OS02G0676500 PROTEIN 1 173 - -
Mal3g2636 190 SMART ring_2 90 131 IPR001841 -
Mal3g2636 190 PANTHER OS11G0150450 PROTEIN 1 173 - -
Mal3g2636 190 SUPERFAMILY RING/U-box 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2636 Mal-Chr3 99270866 99272632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2636 70 135 C3H Transcription Factor Family AT4G10160 51.515 6.03e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2636 - - ccaj:109802319 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2636 3 99270866 99272632 Mal3g2636 3 99270866 99272632 ECH