Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2624 ATGAATATGATGAGAAGGTTGAAGAGCATTGCTTCTGGAAGAACATCTATTTCATCAGATCCTGGTGGAGATTCTACCACAAAAAGATCCAAGTTTGATCAGGAGACTGAAGGAAAGGAGAATAACGAGGAAACAAATTGTGTTGAGAGAGGCGGAAATAATCAGAATAAGTATGTAGATGCATCAACAGAAGAAACATCCAGTACATGTAATTCTAGTGTTTCTGTTGCTAGAACCGAGAAGTCGGGTTATGATCAGCTTCCAAAAGAAGTACATGAAATGAAAATTAAAGATGATAAAAGCAAAAACAACAATGATAAGGATATGGAGGCAACTGTTGTGAACGGAAATGGAACAGAAACTGGTCAAGTAATTACAACTTCTATCGGTGGTCGAGATGGACAACCAAAGAGGATAATCTCATATATGGCAGAACGTGTCGTTGGTACGGGTTCTTTTGGCGTTGTTTATCAGGCTAAGTGCGTTGAAACTGGGGAAGCCGTTGCAATAAAGAAAGTCTTACAAGACAAGAGATATAAAAACAGGGAACTCCAGGTTATGCGTATGCTGGAACATACTAATGTTCTTAAACTAAAGCACTGTTTCTACTCAACGGCTGAAAAAGATGAGGTGTACCTTAACTTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGGATGCACCAACACATGCCTATAATTTATGTTCAACTATATACTTATCAGATATGTCGTGGTTTAAATTATTTGCACCATGTGGTTGGAGTCTGTCATCGTGACATCAAACCTCAGAATCTATTGGTTAATCCCGCCAGTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAAATGTTGATGCCTGGTGAGCCCAACATATCATACATATGCTCGAGGTATTATAGAGCCCCTGAACTTATATTTGGTGCAACGGAATACACAACTGCTATTGATGTTTGGTCTGCTGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACATCCATTGTTTCCTGGAGAGAGTGGGGTTGATCAGTTGGTAGAGATCATTAAGATCTTGGGAACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTCAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGATCTTTCACAAAAGTATGCCTTCGGAAGCAGTGGATCTTGTGTCGAGGATGCTTCAGTATTCGCCAAATCTACGTTGCACTGCTTTGGAAGCATGTGCACACTCCTTCTTTGATGATCTTCGAGACCCAAATGCTCGCTTACCGAATGGGAAAGAACTTCCCCCTTTGTTTGATTTCACCGCTCAAGAGTTGGCAGACGCACCTGATGATTTACGTCGACGTCTCATTCCCGAGCATGCAAGGAGTTGA 1416 0.4089 MNMMRRLKSIASGRTSISSDPGGDSTTKRSKFDQETEGKENNEETNCVERGGNNQNKYVDASTEETSSTCNSSVSVARTEKSGYDQLPKEVHEMKIKDDKSKNNNDKDMEATVVNGNGTETGQVITTSIGGRDGQPKRIISYMAERVVGTGSFGVVYQAKCVETGEAVAIKKVLQDKRYKNRELQVMRMLEHTNVLKLKHCFYSTAEKDEVYLNLVLEYVPETVYRVSKHYVRMHQHMPIIYVQLYTYQICRGLNYLHHVVGVCHRDIKPQNLLVNPASHQLKICDFGSAKMLMPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGHPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKSMPSEAVDLVSRMLQYSPNLRCTALEACAHSFFDDLRDPNARLPNGKELPPLFDFTAQELADAPDDLRRRLIPEHARS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2624 471 Gene3D Phosphorylase Kinase; domain 1 126 221 - -
Mal3g2624 471 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 471 - -
Mal3g2624 471 PANTHER SHAGGY-LIKE KINASE 6 471 - -
Mal3g2624 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mal3g2624 471 Pfam Protein kinase domain 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2624 471 Gene3D Transferase(Phosphotransferase) domain 1 222 470 - -
Mal3g2624 471 MobiDBLite consensus disorder prediction 26 46 - -
Mal3g2624 471 SUPERFAMILY Protein kinase-like (PK-like) 141 453 IPR011009 -
Mal3g2624 471 ProSitePatterns Protein kinases ATP-binding region signature. 148 172 IPR017441 GO:0005524
Mal3g2624 471 MobiDBLite consensus disorder prediction 9 25 - -
Mal3g2624 471 ProSiteProfiles Protein kinase domain profile. 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2624 471 MobiDBLite consensus disorder prediction 1 74 - -
Mal3g2624 471 SMART serkin_6 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2624 471 CDD STKc_GSK3 140 429 IPR039192 -
Mal3g2624 471 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2624 Mal-Chr3 99002787 99006572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2624 142 461 MAP Kinase Gene Family AT1G73670 35.522 1.53e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mal3g2624 Pkinase 6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2624 K00924 - gmx:100786458 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2624 3 99002787 99006572 Mal3g2624 3 99002787 99006572 ECH