Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2622 ATGAACACTCCAAATCCACCTCTTGATTCCACCGCCGACGACACCGAACCGTTTCTCCGCCGCGTCCTCCACCGCACACCACCACTCCGCACCGCCACTCATTTCTTCCGTCGAGCTAGCTCCCAACGCATGATGCTCCGCGAACCATCCGTCCGTGTCCGAGAGAGAGCAGCAACGGAGGTAGAAAACCGGCAGAGAGAATGGGCTTATTCAAAACCCGTTGTAGCACTTGATATAGCGTGGAACTTGTCGTTTCTTGTTGTTAGTGTCGTCGTTTTGGGTTTCAGTAGTGATGAAGAACCGTGTGTTCCTCTTAGGGTGTGGATTTTGGGTTACTTGTTGCAGGGGTTGGTTCATTCGGTGTGTGTTATTTTCGAATTCAGAAGAAGGAGGAGGGAGAGGAATACAGTTTTGGAAGATGATGATGATGCTGATTCTTTTTTAGAGAGTGGTTTTCAGTGGAGTTTCAGTTCTGAGAATGATTCTGATGTGGAGAGTCAGGAAAATAGTATCATGAAGCGCATAGAGTCTGCAAATACTATTCTATCATTCATATGGTGGATTCTTGGGTTCTACTGGGTAACAGCTGGTGGTCAGAGTTTAACAAAGGATTCACCTCAGCTTTACTGGCTCTGTATTACATTTCTTGCTTTCGACGTTGTGATTGTAGTGATTTGTGTTGCTGTTGCATGTCTCATTGGAATTGCTGTTTGCTGTTGTCTTCCATGCATACTTGCTATTTTGTACGCAGTGGCAGATCAGGAAGGGGCAACCAAGGAAGAGATTGACCTGTTGCCAAAATATAAGTTCAGAATGATAAAGGAATCTAAGAAAGAAGGCGATGCCCAAGAATCATCCAGAGGAGTGATGACTGAATGTGACAGTGATACAACATCTGAGCATGTTCTGGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTATGATGATGGGGTTGAACTTAGAGAACTTCCTTGCAACCATCATTTTCATTGCACATGCATTGACAAATGGCTTCTAATCAATGCTACCTGCCCTCTCTGCAAATTTAACATTTTGAGCACTGATGATAACCTCCATCAAGAAGTTTGA 1098 0.4472 MNTPNPPLDSTADDTEPFLRRVLHRTPPLRTATHFFRRASSQRMMLREPSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGFSSDEEPCVPLRVWILGYLLQGLVHSVCVIFEFRRRRRERNTVLEDDDDADSFLESGFQWSFSSENDSDVESQENSIMKRIESANTILSFIWWILGFYWVTAGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQEGATKEEIDLLPKYKFRMIKESKKEGDAQESSRGVMTECDSDTTSEHVLALEDAECCICLSAYDDGVELRELPCNHHFHCTCIDKWLLINATCPLCKFNILSTDDNLHQEV* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2622 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 357 IPR013083 -
Mal3g2622 365 CDD RING-H2_RNF111_like 309 353 - -
Mal3g2622 365 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 364 - -
Mal3g2622 365 SUPERFAMILY RING/U-box 300 357 - -
Mal3g2622 365 Pfam Ring finger domain 309 351 IPR001841 -
Mal3g2622 365 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Mal3g2622 365 SMART ring_2 310 350 IPR001841 -
Mal3g2622 365 PANTHER TARGET OF ERK KINASE MPK-1 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2622 Mal-Chr3 98990932 98994584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2622 1 360 C3H Transcription Factor Family AT1G68070 46.739 2.84e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2622 - - gmx:100795425 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2622 3 98990932 98994584 Mal3g2622 3 98990932 98994584 ECH