Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2613 ATGGATAATAACTATGGTTCTCCATATCGGTATCCAAACCCTTATATGTATCCCCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCATCCACCATATCCACCTCAAGATCCATATGCACATTCTCATAGTCATAGTCATGCTCCTCCTTATCCATATCCTTATATTTCTTCACATTCCTTTAATTATTCCTCCTATCCTAGATCACCACCACCACCATCATCATCATCATCCAATTCTACCACCCCATATGAATATGCATACCCTCCACCTCATCATCAATTAGTACCCTCAGCTCCACCCTCTTATCCTTCTTATCCCTACCATGTTCCTCCAGCCCAGCCTTCCCTTTCACACCATGCTAGCTTATCACAACATGGATCATCCTCTCATCATCATTACTATTATCAACAAAATACTCCTCATGAAGACCGTCCCGATCTCCATTCGCGTCATAATAGCTTCTCTGGTCCTTACTGGCAAGACACATCAAGTTCAACAGGTGTTGGTGGAGTATCACAAACTAGTGGTGGAGATAATTCCAGGCCGTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGATAACAATCCAACTGCTCCGGCTTCGCCTCCAGCTCCTGCCGCTGCAGTTCAACCTTTTGTGCATTCGATTTCGGTACCGAAGTTGCAACAGAAGAAGGAGGATTTTTATGGACATTCTAATAACTCGTTTTCCGGTTGGGGATCCTCGTATTCGAGCCGGGTGAACTCGGGTAGACTTTCGGATTATTCTGGCTCGTTTAGTTCTGGCTCGTTTAATGACTCGATGCATAGTCAGAGCTTGCAGATTGTTCCGGCGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTAGTGTGAGTAATAAAATTGAAGGAACAATGAATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCTGTAATAGGGAGGACTTTTGTCATTAGCAACTCTGAAAATCCTGTTTGGAGTCAACACTTCTATGTTCCTGTCGCACATAACGCTGCTGAAGTGCACTTTTTTGTTAAAGACAGTGATATTGTAGGTTCACAGCTCATTGGTATTGTGGCGATTCCGGTTGAACAAATTTACTCAGGGGCAATAGTTGAAGGAACTTACCCTATACTGAATAATAACGGGAAGCCTTGTAAGCAAGGTGCTGTACTGAGCCTTTCCATTCAGTACATCCCAATGGAGCAATTGAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATCGGTGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGTAGCCTCCCTAACGTGTTGCTTGATAGTGGGCTGTTTTATGTGCATGGAAAGTGTTGGCATGACATCTTTGATGCCATAAGTCAAGCTCGACGCTTGATTTATATTACAGGATGGTCGGTGTGGCACAAAGTTAGGTTGATAAGGGATGACGGTTACACATCCGATTATACCTTAGGTGATCTTCTGAGGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGGCGGTTTTTCAAGCACTCATCAGTCCATGTGCTGCTTTGTCCTCGTATTGGCGGAAAACGACATAGCTGGGTCAAGCAAAAGGAAGTTGGAACTATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATATGATACTCCCCACCACCCTCTCTTCAAGACATTACAGACAATACATAAGGATGACTATCACAACCCCACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACATGGGATTAAAAAGTTAAAAATTTCATATGATGATGCTTTACTTAGGCTGGAAAGAATTCCAGAAGTGATTGGCGTTAATGACACTCCTAGCGGTGAAGATGATCCTGAATCTTGGCATGTTCAGATATTCCGTTCAATTGATTCAACTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTGTGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATCCCAATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAGAGCAAACGAGAGGTTTGCAGTTTATATAGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGTGCTGCCACACAAAGGATTCTATTCTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGATTATTTGAACTTCTTCTGTCTTGGTAATCGAGAGGCCATAAATATATACGAAAATATCAGTGTGTCGGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAAATAGTCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTGGACGATGAATATGTGATTGTGGGATCCGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACAGTCTTGTCCACATGGACAAATCCATGGTTATAGGATGTCACTTTGGGCAGAACATACTGGAACGATTGATGACTGCTTCTTGGAACCCGAGAGCCTTGACTGCGTGCGAAAGGTTAGAGCAATGGGCGAAATGAACTGGAAACAATTTGCATCAAATGAAGTAACAGAGATGAGAGGGCATCTACTGAAATATCCTGTAGAAGTTGATCGAAAGGGGAAAGTCAGATCGCTTCCTGGTCATGAAGAGTTTCCTGATGTTGGAGGAAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA 3342 0.4213 MDNNYGSPYRYPNPYMYPPNPNPNPHPHPHPHPPYPPQDPYAHSHSHSHAPPYPYPYISSHSFNYSSYPRSPPPPSSSSSNSTTPYEYAYPPPHHQLVPSAPPSYPSYPYHVPPAQPSLSHHASLSQHGSSSHHHYYYQQNTPHEDRPDLHSRHNSFSGPYWQDTSSSTGVGGVSQTSGGDNSRPSAYPRLDDLMNNVRLSDNNPTAPASPPAPAAAVQPFVHSISVPKLQQKKEDFYGHSNNSFSGWGSSYSSRVNSGRLSDYSGSFSSGSFNDSMHSQSLQIVPAQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFFVKDSDIVGSQLIGIVAIPVEQIYSGAIVEGTYPILNNNGKPCKQGAVLSLSIQYIPMEQLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGLFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLIRDDGYTSDYTLGDLLRTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIGGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPEVIGVNDTPSGEDDPESWHVQIFRSIDSTSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINIYENISVSGNPPPANSPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSCPHGQIHGYRMSLWAEHTGTIDDCFLEPESLDCVRKVRAMGEMNWKQFASNEVTEMRGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2613 1113 Pfam Phospholipase D Active site motif 626 660 IPR001736 GO:0003824
Mal3g2613 1113 Pfam Phospholipase D Active site motif 960 986 IPR001736 GO:0003824
Mal3g2613 1113 SMART C2_3c 301 423 IPR000008 -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 156 184 - -
Mal3g2613 1113 PANTHER PHOSPHOLIPASE D 191 1113 IPR015679 -
Mal3g2613 1113 PANTHER PHOSPHOLIPASE D ALPHA 1 191 1113 - -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 95 113 - -
Mal3g2613 1113 Gene3D Endonuclease Chain A 770 1009 - -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 12 40 - -
Mal3g2613 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 959 986 IPR001736 GO:0003824
Mal3g2613 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 625 660 IPR001736 GO:0003824
Mal3g2613 1113 SMART pld_4 959 986 IPR001736 GO:0003824
Mal3g2613 1113 SMART pld_4 625 660 IPR001736 GO:0003824
Mal3g2613 1113 SUPERFAMILY Phospholipase D/nuclease 805 1045 - -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 119 138 - -
Mal3g2613 1113 ProSiteProfiles C2 domain profile. 278 424 IPR000008 -
Mal3g2613 1113 Pfam C2 domain 300 426 IPR000008 -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 139 153 - -
Mal3g2613 1113 Pfam Phospholipase D C terminal 1033 1103 IPR024632 -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 66 190 - -
Mal3g2613 1113 CDD C2_plant_PLD 295 447 - -
Mal3g2613 1113 MobiDBLite consensus disorder prediction 1 53 - -
Mal3g2613 1113 Gene3D C2 domain 295 437 IPR035892 -
Mal3g2613 1113 Gene3D Endonuclease Chain A 506 739 - -
Mal3g2613 1113 SUPERFAMILY Phospholipase D/nuclease 504 725 - -
Mal3g2613 1113 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 450 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2613 Mal-Chr3 98866346 98872856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2613 78 1113 Phospholipase D Gene Family (Wang group) AT2G42010 68.475 0.0 1452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2613 K01115 - gmx:100801286 1731.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2613 3 98866346 98872856 Mal3g2613 3 98866346 98872856 ECH