Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal3g2604 | ATGAACGGAAAGGCCAACGTTACCAAAGAACTCAACGCCAAGCACAAGAAGATACTAGAAGGACTTCTTAAATTACCAGAGAATCGGGAATGTGCTGACTGCAAATCTAAAGCTCCGAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAATTTTGGGAGTACATATATCAAAGGTTCGTTCTGCAACTCTTGACACTTGGCTTCCAGAGCAAGTTGCATCCATTCAATCAATGGGAAACGAGAAAGCAAATAGTTATTGGGAAGCAGAATTACCTCCAAATTATGATAGAGGAGGAATTGAAAACTTCATTCGCGCAAAGTATATTTCAAGGGATGGAAATCGAAAAACACCTTCTGGACTGCGTGAAGATAAATCTCCTTCACATTGGCAGAGGCCTGCGGAAAATAGTGGGCATGGTTATGCCACTGTTTCTGAGAATAATTTTGAGGAAAAGAAGAAAACCCAACCAACAAATGCAGTTCCTGCTACAAGACGCAGGGTTCCTGCTCCTCGCAAAGTACCAGAGCAGGTAGCTCCTGCTACCCAACCTCAGCACACTGAGAAAGTGGAACCAGCAGCCCCGCAACAACAAGCTGAAACTTCAAAGCCGGCTACAAACACAGCTCAAAGTACCCCTCCCAAAGTAGACTATGCTACAAACCTTTTCAACATGTTGTCTATGGATGACACAAATGAAAATGGCTCCAAAGCAGCTGGTGCTACTGCGGATGATATTAACTGGGCATGCTTTCAGTCTGCTGCAGAGGTGTCAACAGCTGAGAAGACTGGTCCACCGAATGCAGTTGAGAGTACTCCTCAATCTGCACCTGGAATTGAGGATCTATATAGTGATTCATTTTCTGTGACACCAAGTTTAGCTCCAGTAAAACCACAGAAAGATGTGAAAAATGATATAATGAGCCTCTTTGAGAGGGGGGATAACAATATCGTATCTCCATTTTCAATGCATCAACAACGGCTTGCCATGCTAGCGCAGCAGCAGTCTCTTCTGATGGCTGCTGCAGCTAAGTCTACTGGTGTGGATCTCAAGTATCCTACTAGCATACAACAGCCGAGTCCCAATGTTTCTGTCCAAAATTGGCCGGCTACTGGATTCCCGATATCTGGAGTAGTGCCCATTGGTGCTCAGGGAGAGTTGCAGAATCATATGCAGACTAGGAACATGACACCAGCATATCCGGCAGGAAACTCTGTTCAATATCCACCTTCATATGGGCAGTTAACTCCCCTATCATGTAGTCTCACACGGGTTGGAAAACAGTTTCCGCAAATTCTCCAAAGCAAATTTTTTACTGTTGGTGGTGCATGTACTTTCCATAGTAATGACCAATTACCTTGA | 1389 | 0.4428 | MNGKANVTKELNAKHKKILEGLLKLPENRECADCKSKAPRWASVNLGIFICMQCSGIHRILGVHISKVRSATLDTWLPEQVASIQSMGNEKANSYWEAELPPNYDRGGIENFIRAKYISRDGNRKTPSGLREDKSPSHWQRPAENSGHGYATVSENNFEEKKKTQPTNAVPATRRRVPAPRKVPEQVAPATQPQHTEKVEPAAPQQQAETSKPATNTAQSTPPKVDYATNLFNMLSMDDTNENGSKAAGATADDINWACFQSAAEVSTAEKTGPPNAVESTPQSAPGIEDLYSDSFSVTPSLAPVKPQKDVKNDIMSLFERGDNNIVSPFSMHQQRLAMLAQQQSLLMAAAAKSTGVDLKYPTSIQQPSPNVSVQNWPATGFPISGVVPIGAQGELQNHMQTRNMTPAYPAGNSVQYPPSYGQLTPLSCSLTRVGKQFPQILQSKFFTVGGACTFHSNDQLP* | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal3g2604 | 462 | PRINTS | HIV Rev interacting protein signature | 28 | 47 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | PRINTS | HIV Rev interacting protein signature | 68 | 89 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | PRINTS | HIV Rev interacting protein signature | 47 | 64 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 | 1 | 440 | IPR044520 | GO:0005096 | |
Mal3g2604 | 462 | PANTHER | ARF GTPASE ACTIVATOR | 1 | 440 | - | - | |
Mal3g2604 | 462 | CDD | ArfGap | 19 | 117 | - | - | |
Mal3g2604 | 462 | SMART | arf_gap_3 | 16 | 130 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 15 | 120 | IPR037278 | - | |
Mal3g2604 | 462 | MobiDBLite | consensus disorder prediction | 120 | 139 | - | - | |
Mal3g2604 | 462 | Gene3D | Arf GTPase activating protein | 2 | 125 | IPR038508 | - | |
Mal3g2604 | 462 | MobiDBLite | consensus disorder prediction | 120 | 225 | - | - | |
Mal3g2604 | 462 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 16 | 117 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | Pfam | Putative GTPase activating protein for Arf | 17 | 122 | IPR001164 | GO:0005096 | |
Mal3g2604 | 462 | MobiDBLite | consensus disorder prediction | 189 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal3g2604 | Mal-Chr3 | 98713971 | 98719441 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal3g2604 | 16 | 117 | C2H2 Transcription Factor Family | AT4G05330 | 50.000 | 8.42e-28 | 111 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal3g2604 | K12486 | - | gmx:100780452 | 610.142 |