Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2604 ATGAACGGAAAGGCCAACGTTACCAAAGAACTCAACGCCAAGCACAAGAAGATACTAGAAGGACTTCTTAAATTACCAGAGAATCGGGAATGTGCTGACTGCAAATCTAAAGCTCCGAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAATTTTGGGAGTACATATATCAAAGGTTCGTTCTGCAACTCTTGACACTTGGCTTCCAGAGCAAGTTGCATCCATTCAATCAATGGGAAACGAGAAAGCAAATAGTTATTGGGAAGCAGAATTACCTCCAAATTATGATAGAGGAGGAATTGAAAACTTCATTCGCGCAAAGTATATTTCAAGGGATGGAAATCGAAAAACACCTTCTGGACTGCGTGAAGATAAATCTCCTTCACATTGGCAGAGGCCTGCGGAAAATAGTGGGCATGGTTATGCCACTGTTTCTGAGAATAATTTTGAGGAAAAGAAGAAAACCCAACCAACAAATGCAGTTCCTGCTACAAGACGCAGGGTTCCTGCTCCTCGCAAAGTACCAGAGCAGGTAGCTCCTGCTACCCAACCTCAGCACACTGAGAAAGTGGAACCAGCAGCCCCGCAACAACAAGCTGAAACTTCAAAGCCGGCTACAAACACAGCTCAAAGTACCCCTCCCAAAGTAGACTATGCTACAAACCTTTTCAACATGTTGTCTATGGATGACACAAATGAAAATGGCTCCAAAGCAGCTGGTGCTACTGCGGATGATATTAACTGGGCATGCTTTCAGTCTGCTGCAGAGGTGTCAACAGCTGAGAAGACTGGTCCACCGAATGCAGTTGAGAGTACTCCTCAATCTGCACCTGGAATTGAGGATCTATATAGTGATTCATTTTCTGTGACACCAAGTTTAGCTCCAGTAAAACCACAGAAAGATGTGAAAAATGATATAATGAGCCTCTTTGAGAGGGGGGATAACAATATCGTATCTCCATTTTCAATGCATCAACAACGGCTTGCCATGCTAGCGCAGCAGCAGTCTCTTCTGATGGCTGCTGCAGCTAAGTCTACTGGTGTGGATCTCAAGTATCCTACTAGCATACAACAGCCGAGTCCCAATGTTTCTGTCCAAAATTGGCCGGCTACTGGATTCCCGATATCTGGAGTAGTGCCCATTGGTGCTCAGGGAGAGTTGCAGAATCATATGCAGACTAGGAACATGACACCAGCATATCCGGCAGGAAACTCTGTTCAATATCCACCTTCATATGGGCAGTTAACTCCCCTATCATGTAGTCTCACACGGGTTGGAAAACAGTTTCCGCAAATTCTCCAAAGCAAATTTTTTACTGTTGGTGGTGCATGTACTTTCCATAGTAATGACCAATTACCTTGA 1389 0.4428 MNGKANVTKELNAKHKKILEGLLKLPENRECADCKSKAPRWASVNLGIFICMQCSGIHRILGVHISKVRSATLDTWLPEQVASIQSMGNEKANSYWEAELPPNYDRGGIENFIRAKYISRDGNRKTPSGLREDKSPSHWQRPAENSGHGYATVSENNFEEKKKTQPTNAVPATRRRVPAPRKVPEQVAPATQPQHTEKVEPAAPQQQAETSKPATNTAQSTPPKVDYATNLFNMLSMDDTNENGSKAAGATADDINWACFQSAAEVSTAEKTGPPNAVESTPQSAPGIEDLYSDSFSVTPSLAPVKPQKDVKNDIMSLFERGDNNIVSPFSMHQQRLAMLAQQQSLLMAAAAKSTGVDLKYPTSIQQPSPNVSVQNWPATGFPISGVVPIGAQGELQNHMQTRNMTPAYPAGNSVQYPPSYGQLTPLSCSLTRVGKQFPQILQSKFFTVGGACTFHSNDQLP* 463
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2604 462 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mal3g2604 462 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mal3g2604 462 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mal3g2604 462 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 440 IPR044520 GO:0005096
Mal3g2604 462 PANTHER ARF GTPASE ACTIVATOR 1 440 - -
Mal3g2604 462 CDD ArfGap 19 117 - -
Mal3g2604 462 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Mal3g2604 462 SUPERFAMILY ArfGap/RecO-like zinc finger 15 120 IPR037278 -
Mal3g2604 462 MobiDBLite consensus disorder prediction 120 139 - -
Mal3g2604 462 Gene3D Arf GTPase activating protein 2 125 IPR038508 -
Mal3g2604 462 MobiDBLite consensus disorder prediction 120 225 - -
Mal3g2604 462 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 117 IPR001164 GO:0005096
Mal3g2604 462 Pfam Putative GTPase activating protein for Arf 17 122 IPR001164 GO:0005096
Mal3g2604 462 MobiDBLite consensus disorder prediction 189 225 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal3g2604 Mal-Chr3 98713971 98719441 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2604 16 117 C2H2 Transcription Factor Family AT4G05330 50.000 8.42e-28 111
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2604 K12486 - gmx:100780452 610.142