Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2594 ATGATGTCAGTAGAAATTGTCCAGACTCGTGAGCAAGATCAAATAACTCCTGTGCCAGTAGAAGTTACTACTGATGAAGAAATTCATGAAGAGGCAGCAGTGTGCAGGATATGTCTTGATGTGTGCGATGAAAGAAATATCTTTAAAATGGAATGCAGTTGCAAAGGTGACCAGAGATTGGTGCATGAAGAATGTTTAATTAAATGGTTCAGCACAAAAGGAAACAAGAAATGTGATGTATGCTTGACAGAGGTTCAGAATTTACCGGCAAACTTGGTCCATGTGTCCCGCTCTTTTCAAATAAGAAACATACGGTTAAGTCCTTGGCAAAACTTTGTGGTGCTTGTCCTGATAAGCACACTAGGCTATTTTCACTTCCTTGCACAGCTACTGTATCATGATTTGAAGACTCAAGATATCATTATATCAGCAGCAGTTTCCTTTACATTGGGCCTCGTGGCTTCTGTTTTTGCATTTTTCCTTGCAATCAGAGAGTATATGTGGCTATATGCTCTTCTTGAGTTTGGACTTGTGGATGTAATTTTGCGACTGTTTTATTCTTTGTTGCATTTGGCGCCAATTTATTCAATACCACTTTCATCAGTTTTAGGTTTTGGAATTACTATGGGAATCAACTATATGTATATCAAGCGTGTGAATCGGAGACTTCAGGTCTCTACTAATGATATCCCAGTATGA 699 0.3863 MMSVEIVQTREQDQITPVPVEVTTDEEIHEEAAVCRICLDVCDERNIFKMECSCKGDQRLVHEECLIKWFSTKGNKKCDVCLTEVQNLPANLVHVSRSFQIRNIRLSPWQNFVVLVLISTLGYFHFLAQLLYHDLKTQDIIISAAVSFTLGLVASVFAFFLAIREYMWLYALLEFGLVDVILRLFYSLLHLAPIYSIPLSSVLGFGITMGINYMYIKRVNRRLQVSTNDIPV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2594 232 PANTHER OS02G0165000 PROTEIN 7 232 - -
Mal3g2594 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 90 IPR013083 -
Mal3g2594 232 SMART ringv_2 34 82 IPR011016 GO:0008270
Mal3g2594 232 PANTHER ZINC FINGER PROTEIN 7 232 - -
Mal3g2594 232 CDD RING_CH-C4HC3_MARCH 35 81 - -
Mal3g2594 232 Pfam RING-variant domain 35 81 IPR011016 GO:0008270
Mal3g2594 232 ProSiteProfiles Zinc finger RING-CH-type profile. 27 88 IPR011016 GO:0008270
Mal3g2594 232 SUPERFAMILY RING/U-box 31 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2594 Mal-Chr3 98564087 98566562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2594 21 105 C3H Transcription Factor Family AT2G37950 29.885 9.15e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2594 - - mtr:MTR_7g075700 380.948