Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2572 ATGAGTCTAAACTCTAGTGGCGGCGGAAATAGTGGTAGCCCTTGTGGGGCTTGCAAGTTTTTGAGGAGGAAGTGTGTGCAAGGGTGTATTTTTGCTCCATATTTTGATTCGGAGCATGGTACAACACACTTTGCAGCTGTGCACAAAGTGTTTGGAGCTAGCAATGTATCCAAACTTCTTCTTGGAATTCCAATTCATAGGAGACTTGATGCTGCAGTCTCTCTTTGTTATGAAGCTCAATCAAGGTTGAGAGATCCTGTCTATGGATGTGTTGGTCATATCGTTGCCCTTCAGCAACAGGTGATAAGCTTACAAGCTGAACTCTCCTACTTACAAAGCCACATTAATTCAACAGAGTTAACCCAACAACCACCTCTACCACCACCACCACCACCACCACAGGCGGCCGCGGCCCCAACGGTCTTCTCATTTGCCGACCTTCCACCAGCCACCGCCACAACTATGTCGGTGACCTATGATATGTCTACACTTTTTGACTCAATGGGACAACCTTCATTGGCCATGCAACAACAAAGGACCAATATTGACCCACGTCAATATTTAGCTGCTCATCATGGCTCAACATCAACCACCAGTGCTGGGATTCAATCAGTGGCATGTGACCTTACTCATAGACAAATTGGCTCTTCATCTGTACCATCTTCCAATGCCTCATCATCTGCTTCGTTTTCCAAATTTTCTAAATAA 708 0.4548 MSLNSSGGGNSGSPCGACKFLRRKCVQGCIFAPYFDSEHGTTHFAAVHKVFGASNVSKLLLGIPIHRRLDAAVSLCYEAQSRLRDPVYGCVGHIVALQQQVISLQAELSYLQSHINSTELTQQPPLPPPPPPPQAAAAPTVFSFADLPPATATTMSVTYDMSTLFDSMGQPSLAMQQQRTNIDPRQYLAAHHGSTSTTSAGIQSVACDLTHRQIGSSSVPSSNASSSASFSKFSK* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2572 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 212 - -
Mal3g2572 235 MobiDBLite consensus disorder prediction 119 138 - -
Mal3g2572 235 MobiDBLite consensus disorder prediction 213 235 - -
Mal3g2572 235 MobiDBLite consensus disorder prediction 122 137 - -
Mal3g2572 235 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Mal3g2572 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 212 - -
Mal3g2572 235 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2572 Mal-Chr3 98098601 98102747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2572 17 232 AS2 family AT2G45420 52.444 1.86e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g2572 LOB 4.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2572 K21994 - gmx:100790517 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2572 3 98098601 98102747 Mal5g1643 5 32278386 32284836 PCT