Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2571 ATGGATTTGGAATGTGGTGGTAGAGATGAGGGTGGTGGGCCTTGTGGTGCTTGCAAGTTTTTAAGAAGAAAGTGTGTGAAAGATAGTTGCATATTTGCACCATATTTTGAGTCATCAGGACAAGGAAGTGCTCATTTTGCTGCAGTTCATAAGGTGTTTGGTGCTAGCAATGCTTCTAAGTTACTCATGCGCATTCCAGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGTTATGAGGCTCTTGCTAGAGCTACTGATCCTGTTTATGGTTGTGTTGCTCACATCTTTGCTCTTCAACAACAGGTGATGGATAAGTCATGTATTGATATCCTTAGTTTTCCTTCTAGTGGTCGCTTTTGA 363 0.4105 MDLECGGRDEGGGPCGACKFLRRKCVKDSCIFAPYFESSGQGSAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARATDPVYGCVAHIFALQQQVMDKSCIDILSFPSSGRF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2571 120 ProSiteProfiles LOB domain profile. 13 117 IPR004883 -
Mal3g2571 120 Pfam Lateral organ boundaries (LOB) domain 14 105 IPR004883 -
Mal3g2571 120 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 105 - -
Mal3g2571 120 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2571 Mal-Chr3 98050149 98050769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2571 12 105 AS2 family AT4G00210 78.723 5.99e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g2571 LOB 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2571 - - mtr:MTR_7g075230 194.897