Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2550 ATGGCTGCTTGTGCTTTGTTCAATGGTGGTGTAGGAAATACAACTACTGATGAAACCAACAACAATAGTGCATCTAACTCCAGCAATATCAGTAGTGAAGATTTACACAACAACATGCCACAGCCTCATTCTGAAAGAAAAGTGCTTAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACTTCAAGTCCACAACAACAACAACAACAATTCTTGTTCAACAAATGATTATCATAGATTTTCTCGTAGAAACAACAACAACATATCCTCATTGAATTGCTCTTTACCTTCATCCACACAAAAAGGTGTCACCACAACAACAACACTAGCAGCAGGTACAACTACAAATAATAGTACTAATACTAATACTAATAATAATAACTATCATTATCATAATACTAATAATAATAATATTAACAATAATAATCATAGTAATGTTGTTGCTTTGTCGTCACGAGATAACGTTGCTATTCAAAATTACCCCACTGTGACCGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCTTCCAACAATCTCAACAATTCCTCAACCTCTTCACCTCCAAATTTCACTCATCATTTCCAACAAGTTGAGGAACAAAACCATGTTCCTAATATCTGTGGTTTCTCTGGTTTACCACTTTTTCCATCTCAATCTCAAAACCAAACAAACAGAACCAATAACAACAACAACAGAAACAGTAGTAGTAACATAACTTCTGCTACTAATATTGTTGATGTTGTTTCACCTTCTATGATGGATGAAACATCAGCTACCACAAACTGGATTGATGGTATTTTGAAGGATCTTATTCATACTTCAAACAGTGTTTCCATTCCTCAACTCATCAACAATGTTAGAGAGATTATATATCCTTGTAATCCAAATCTTGCTCTTGTTCTTGAACATAGACTTCGTCTTCTCACAGAAACTGCTCCAACAAACACTTGTATTGCTCCTCCAGAGAGAAAAAGAAACAACAATGAACAACAAAGTGTTGCTAATGTTAATGTTTTACCACCTCCTAATCGTGTAGTTGATGATATTGTTCCACATTTTTCTGATTCATCAACTCTTCTCAATCAAAATCAAAATCAAAACATGTTTCCAAATTGGGGTGTGCCTCAAATCAATACCAACAACAACAATAACAACCCTTTGGTTACTTTACCTTCACAACCAATTTCAACACAACAAGATCAACAACAACATCAAGAGCATCAACAAGATCTTGCACCTGCAACAATTACAACACCAACTTCTGCTGAGTTGGCAATAGCAAGAAAGAAGAAAGAGGATATTAAAGAACAAAAGAAGAAAGATGAAGAAGGTTTACACCTTCTAACATTACTTCTTCAATGTGCAGAAGCAGTATCAGCAGAGAATCTAGACCAAGCAAACAAGATGTTACTCGAAATTTCGCAGCTTTCGACGCCTTTCGGCACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCAATTTCAGCTAGATTAGTGAGTTCATGTTTAGGAATCTATGCAACACTTCCACCACACACACTACATAATCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGTATTAGTCCATTTGTGAAATTCTCTCATTTCACTGCTAACCAAGCTATACAAGAAGCTTTTGATAGAGAAGAAAGAGTTCATATCATAGATCTTGATATCATGCAAGGTTTACAATGGCCTGGTCTTTTTCATATCCTTGCTTCAAGACCAGGTGGACCTCCTTATGTGAGACTCACTGGATTAGGTACTAACATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGATTTTGCATCTAAACTTGGTCTTCCTTTTGAGTTTTTTCCTGTTGCTGAGAGAGTTGGAAACATTGATGTTGAAAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGTTCAGATACAAACACTTTATGGCTCTTGCAAAGGTTGGCACCGAAATTGGTAACGGTGGTGGAGCAAGACTTGAGCAATGCAGGTTCATTCTTGGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCATTATTTGATTCTCTTGGTTCAAGCTATGGAGAAGAGAGTGAAGAGAGACATGTGGTGGAGCAACAGCTATTATCAAGAGAGATTCGTAATGTACTTGCAGTTGGTGGACCATCAAGGAGTGGTGAGATAAAGTTTCATAATTGGAGAGAAAAGCTTCAACAGTGTGGTTTTAGAGGTATCTCTTTGGCTGGTAATGCTGCTACACAAGCTAGTCTTCTTCTTGGCATGTTCCCTTCTGAAGGGTATACTTTGGTTGAGGATAATGGTATCCTTAAACTTGGTTGGAAAGATCTTTGTTTGCTTACTGCTTCTGCTTGGAGACCTCCCTTTCATACCAACAATGTCATTCCACATCATAACTAA 2460 0.3703 MAACALFNGGVGNTTTDETNNNSASNSSNISSEDLHNNMPQPHSERKVLRKRMASEMELQLQVHNNNNNNSCSTNDYHRFSRRNNNNISSLNCSLPSSTQKGVTTTTTLAAGTTTNNSTNTNTNNNNYHYHNTNNNNINNNNHSNVVALSSRDNVAIQNYPTVTVTTNYSTMLLPSSSNNLNNSSTSSPPNFTHHFQQVEEQNHVPNICGFSGLPLFPSQSQNQTNRTNNNNNRNSSSNITSATNIVDVVSPSMMDETSATTNWIDGILKDLIHTSNSVSIPQLINNVREIIYPCNPNLALVLEHRLRLLTETAPTNTCIAPPERKRNNNEQQSVANVNVLPPPNRVVDDIVPHFSDSSTLLNQNQNQNMFPNWGVPQINTNNNNNNPLVTLPSQPISTQQDQQQHQEHQQDLAPATITTPTSAELAIARKKKEDIKEQKKKDEEGLHLLTLLLQCAEAVSAENLDQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPPHTLHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTNMETLEATGKRLSDFASKLGLPFEFFPVAERVGNIDVEKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKLVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNNVIPHHN* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2550 819 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 808 IPR005202 -
Mal3g2550 819 MobiDBLite consensus disorder prediction 380 417 - -
Mal3g2550 819 MobiDBLite consensus disorder prediction 9 38 - -
Mal3g2550 819 ProSiteProfiles GRAS family profile. 440 806 IPR005202 -
Mal3g2550 819 MobiDBLite consensus disorder prediction 7 47 - -
Mal3g2550 819 MobiDBLite consensus disorder prediction 219 240 - -
Mal3g2550 819 Pfam GRAS domain family 450 806 IPR005202 -
Mal3g2550 819 PANTHER PROTEIN SCARECROW 178 808 - -
Mal3g2550 819 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2550 Mal-Chr3 97687685 97690716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2550 421 809 GRAS Transcription Factor Family AT5G41920 55.276 8.02e-144 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal3g2550 GRAS 1.7e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2550 - - gmx:100806779 918.687