Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2548 ATGATGATTGCACTTGGTGCTGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGGCCCGTAATCTATCGCGACTTCAAGACGTCTAATATATTGTTGGACTCTGACTATACAGCCAAGCTTTCCGATTTTGGGTTAGCTAAAGCAGGGCCTCAAGGTGATGAAACCCATGTATCAACCAGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATATGTAATGACTGGTCACCTAACAGCTAGGAGTGATGTATATAGCTTTGGGGTTGTTCTTTTGGAGCTTTTAACAGGAAGGAAATCCGTCGACAAGACCAGACCTGGGAAGGAACAAAGCTTGGTAGATTGGGCACGTCCAAAGCTCAATGACAAGAGAAAGCTCCTACAAATAATTGATCCTAGATTGGAAAATCAATATTCAGTGAGAGCAGCACAGAAAGCATGTAGTCTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCAAGGCCGCTAATGAGTGATGTAGTTGAGACATTGGAACCTTTACAAAGTTCTAGTGTTGGTGCAGACGAAGTCTCATTATCAGGATCAAATAGTGGGAGTAACGGTCCTTTTGCTATGAACAAAATCTCTGACTACCGAATGCGTCACAAGTTTTCAAACAACGTTGGTCCAGGTGCTACTTGTCGGTCACCAAACCCAAATTGCTCGCCGGGTGCTCCTGCAGCATTACGGGTCAGATGA 723 0.4454 MMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGADEVSLSGSNSGSNGPFAMNKISDYRMRHKFSNNVGPGATCRSPNPNCSPGAPAALRVR* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2548 240 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Mal3g2548 240 Pfam Protein kinase domain 4 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2548 240 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 1 227 - -
Mal3g2548 240 MobiDBLite consensus disorder prediction 217 240 - -
Mal3g2548 240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Mal3g2548 240 SUPERFAMILY Protein kinase-like (PK-like) 2 171 IPR011009 -
Mal3g2548 240 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2548 240 PANTHER OS01G0588500 PROTEIN-RELATED 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2548 Mal-Chr3 97629132 97630493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2548 1 182 Glycoside Hydrolase AT3G07070 56.284 5.54e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal3g2548 Pkinase 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2548 - - gmx:102662348 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2548 3 97629132 97630493 Mal3g2548 3 97629132 97630493 ECH