Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2547 ATGGGCAACTGCGGTACTAGAGAAGAATCCGCCGTCGTTTCCAATGCTCAAGTTCCGCATCCTGCTGCCGGAGCTAGAAACCAAACCTCCATCACCGGCACCGGCGCAATCGAGAGAAAAAACTCCAGTCTACGTCATCATCTAACCGATTCCGCTTCGGATCTGAGCGAGTCTTGTTCAACACCACGCTGGAACAACGCAAACAACAACAACACGCTTCTATACACTCACGTTATAGCTTTCACGCTCTACGAGCTTGAAACTATAACGAAAAGCTTTCGTGCTGATTATATTCTCGGTGAAGGAGGGTTTGGTACTGTTTATAAAGGCTACATTGATGAGAATGTTAGGGTTGGACTTAAATCGCTTCCGGTTGCGGTTAAGGTTTTGAATAAAGAAGGACTTCAAGGACATCGCGAATGGCTTACGGAGGTGAATTTTCTTGGGCAGTTAAGGCATCCTAACCTTGTGAAGTTGATTGGTTATTGCTGTGAGGATGATCACAGGCTGCTTGTTTATGAATTCATGTTTCGAGGGAGTTTGGAGAATCATCTATTCCGAAGTTTCCAGAGGCAACTGTTCCTTTAA 588 0.4541 MGNCGTREESAVVSNAQVPHPAAGARNQTSITGTGAIERKNSSLRHHLTDSASDLSESCSTPRWNNANNNNTLLYTHVIAFTLYELETITKSFRADYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRSFQRQLFL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2547 195 SUPERFAMILY Protein kinase-like (PK-like) 61 189 IPR011009 -
Mal3g2547 195 PANTHER OS01G0588500 PROTEIN-RELATED 43 189 - -
Mal3g2547 195 Pfam Protein tyrosine and serine/threonine kinase 98 188 IPR001245 GO:0004672|GO:0006468
Mal3g2547 195 Gene3D Phosphorylase Kinase; domain 1 54 175 - -
Mal3g2547 195 PANTHER - 43 189 - -
Mal3g2547 195 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Mal3g2547 195 ProSiteProfiles Protein kinase domain profile. 93 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2547 195 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2547 Mal-Chr3 97627733 97629117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2547 57 195 Glycoside Hydrolase AT3G07070 45.775 4.59e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal3g2547 PK_Tyr_Ser-Thr 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2547 - - gmx:100796854 298.516