Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2542 ATGTGGACTTGGGATCTCACACATGACAAAGGTTATACTTACGAAGAATATTGTGTAGGAATCGACCTTGGTACAAAGTATGAAGGATATTGTGTAGGAATTGACCTTGGTACAACGTATTCGTGTGTTGCAGTGTGGAATGAGCAACACAACAGAGTGGATATTATTCACAATGAACAAGGTAACAGAACCACACCTTCTTGTGTTGCTTTCACCGACAAACAAAGGTTGATTGGTGATGCTGCTAAGAATCAAGCTGCTACTAACTCACAAAACACTATCTTCGATGCTAAGAGGTTAATTGGTAGGAATTTTAGTGATGATGTTGTTCAAAAAGATATTAAGTTGTGGCCATTCAAAGTCATTGCTGACAAAAACAGAAAACCCTTGGTTGTAGTTAAGTACAAGGGTCAAGAGAAGCATCTATGTGCGGAGGAAATTTCATCAATGATCCTCACGAAAATGCGGGAAATTGCTGAGGCATATTTGCAATCACCGGTTAAGAATGCGGTTATTACTGTACCAGCTTATTTCAATCATTCTCAACGAAAGGCCACCATAGATGCCGGTGTCATTGCTGGCCTTAATGTTATGCGTATAATGAGTGAGCCCACTGCCGCAGCTGTTGCATATGGTCTTGACATGAATACAAACTGTACTGGAGAACGGAATATTTTTGTTTTTGACCTTGGCGGTGGGACTTTTGATGTGTCTCTTGTTACAATTAAGGATAAGTTCTTCAGAGTTAAGGCTACTGCTGGAAACACTCACCTCGGTGGAGAGGACTTTGATAATAGAATGGTGAACTACTTTGTGCAAGAGTTCAGGAGGAAGAAACGAGTGGACATTACTGGGAACCCAAGAGCATTGAGGAGGTTGAGAACAGCATGTGAGAGGGCAAAAAAGACCCTCTCTTTTTCTGTTGACACTACTGTTGAGGTAGATGCTCTATATGCTGGCATTGACTTCTTTTCATCAATCACTCGTGCAAAGTTTGAGGAAATCAATATGGACCTCTTTAATGAATGTATGGAAACTGTTGAGAGTTGTCTTACTGACTCTAAGATCGACAAGAGTAGTATAGATGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGGGAGAATTTTTCATGGGAAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTTTGGGGCAGCCGTGCGGGCTGCTTTGATGAGTGATGCCATTGAGAATGTTCCAAACTTAGTGTTGATCGATGTTACACCCCTGTCTTTAGGTTTTGTGCTACAACATGATTGTATGAGTGTAGTGATTCCAAGGAATACTGCTATACCTGTCAAGAAGACGATCACCTGTGGAACAGTTAAGGATAACCAATCCTCGGTCTTGATAAAGATTTATGAGGGTGAGAGAACTAAAGCTAGTGACAACAATCTGCTTGGTTCTTTTAGTCTCTCTGGGATTTCCCCTGCGCTTCGTTACCATCCTATTGGTGTATGTTTTTCTATTGATGAAAATGGTATTTTGACAGTTTCTGCTGAGGAAGTATCCACCGGCATTATGAATGAGATTACAATAACCAATTTCAGAGAGAGGTTATCAGCTGAAGAAATTAAAAAATTGATTAAAGAAGCTGAGAATTACAGTGCTGAAGATAAGAAATTCCTACAAATGGCTCAAGTAAAGAATGCATTGGATAACTGCATTTACAAAATAGAAACTGCTTTCAATAAGCAGAATGTTAACTTGAAGCTCTCAACACAACAGAACATAAAGATCAAATCTGCAATTACAAAGGCTAAAAAATTGCTTGACGAGAATCACCAGCATGAATTAGATGTTCTTGAGGATCATCTGAAGAAGCTCGAATGTATGTTTGAAAACATTATAGCCAAGAAGATTGGTTAG 1923 0.3994 MWTWDLTHDKGYTYEEYCVGIDLGTKYEGYCVGIDLGTTYSCVAVWNEQHNRVDIIHNEQGNRTTPSCVAFTDKQRLIGDAAKNQAATNSQNTIFDAKRLIGRNFSDDVVQKDIKLWPFKVIADKNRKPLVVVKYKGQEKHLCAEEISSMILTKMREIAEAYLQSPVKNAVITVPAYFNHSQRKATIDAGVIAGLNVMRIMSEPTAAAVAYGLDMNTNCTGERNIFVFDLGGGTFDVSLVTIKDKFFRVKATAGNTHLGGEDFDNRMVNYFVQEFRRKKRVDITGNPRALRRLRTACERAKKTLSFSVDTTVEVDALYAGIDFFSSITRAKFEEINMDLFNECMETVESCLTDSKIDKSSIDDVVLVGGSSRIPKVQQLLGEFFMGKDLCKSINPDEAVAFGAAVRAALMSDAIENVPNLVLIDVTPLSLGFVLQHDCMSVVIPRNTAIPVKKTITCGTVKDNQSSVLIKIYEGERTKASDNNLLGSFSLSGISPALRYHPIGVCFSIDENGILTVSAEEVSTGIMNEITITNFRERLSAEEIKKLIKEAENYSAEDKKFLQMAQVKNALDNCIYKIETAFNKQNVNLKLSTQQNIKIKSAITKAKKLLDENHQHELDVLEDHLKKLECMFENIIAKKIG* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2542 640 ProSitePatterns Heat shock hsp70 proteins family signature 2. 227 240 IPR018181 -
Mal3g2542 640 Gene3D - 95 150 - -
Mal3g2542 640 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 414 566 IPR029047 -
Mal3g2542 640 Gene3D - 567 640 IPR029048 -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 170 190 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 82 90 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 393 413 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 499 515 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 361 377 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 233 243 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 30 43 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 60 72 - -
Mal3g2542 640 PRINTS 70kDa heat shock protein signature 419 438 - -
Mal3g2542 640 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 415 571 IPR029047 -
Mal3g2542 640 SUPERFAMILY Actin-like ATPase domain 222 409 IPR043129 -
Mal3g2542 640 ProSitePatterns Heat shock hsp70 proteins family signature 3. 364 378 IPR018181 -
Mal3g2542 640 Gene3D - 32 408 - -
Mal3g2542 640 SUPERFAMILY Actin-like ATPase domain 30 215 IPR043129 -
Mal3g2542 640 Gene3D Actin; Chain A, domain 4 259 342 - -
Mal3g2542 640 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 566 638 IPR029048 -
Mal3g2542 640 Pfam Hsp70 protein 32 636 IPR013126 GO:0005524|GO:0140662
Mal3g2542 640 PANTHER HEAT SHOCK PROTEIN 70KDA 26 638 IPR013126 GO:0005524|GO:0140662
Mal3g2542 640 PANTHER HEAT SHOCK 70 KDA PROTEIN 26 638 - -
Mal3g2542 640 Gene3D - 216 390 - -
Mal3g2542 640 Coils Coil 610 637 - -
Mal3g2542 640 ProSitePatterns Heat shock hsp70 proteins family signature 1. 34 41 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2542 Mal-Chr3 97521972 97526603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2542 23 637 Calmodulin-binding Proteins AT3G12580 63.209 0.0 798