Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2531 ATGGAAGGGAACGGGGACATGTTCAGATCATCTCCGGTTGCCGGAGCATCATCATCGTCGAGAAGATACGGATTCCCGTCGGCAGCCAGCATAATCCAAGCACCGTTATCGGCGCTTTTGGAATATTCCGGTATTCTTCCGGCGAGGTCAAACCAACAGCCACATCAACCAATTCCTGATTCTGTCCCTAACGATGGCGAGGTTTCAATTAGGATTATTGGTTCTAACGAGCAAGATAATCACCGGGAAGAAGAGGGTTCTTCGGTAGTGACGAATGATGGTGGTGGTGTGGCTGCGATGACGTCGAATGGTGATGTTGAGGGCGCTTCCAGAACAGGGAGTGGAAATGTTGATGCAGAAGCAGGTGGTGGTGGTGATATTGGTGCTAATGGGAGAGATTCTTCTTATCAGAGATATGATATTCAACATGCTGCTAGGTGGATTGAGCAAGTCTTGCCGTTTTCTTTGCTTCTTTTGGTGGTTTTCATTCGCCAACATTTGCAAGGGTTTTTTGTTACCATTTGGATTGCTGCTGTGCTTTTCAAGTCAAATGATATTCTGCGGAAACAAACGGCGTTGAAGGGAGAGAGGAAAATGCCAGTTTTGATTGGAATTTCTGTTGCTTTTGCACTTCATGTGATTGGCGTTTATTGGTGGTATCAGAATGATGATCTAATGTATCCGTTAGTCATGCTTCCTCCCAAAGAGATACCGCCTTTCTGGCACGCTATTTTCATCATCATGGTGAATGATACTTTGGCGCGCCAGGCTGCAATGGTAGTCAAGTGTATATTGTTAATGTATTATAAGAACAGCAGAGGCCGCAATTATCGTAAGCAGGGGCAAATGTTGACTTTAGTTGAATACCTCCTCTTACTTTACCGAGCCTTGTTGCCAGCACCAGTTTGGTATCGTTTCTTCCTGAACAAAGAATATGGAAGCCTCTTTTCATCACTGATGACAGGATTGTATCTAACATTTAAGCTCACATCTGTTGTTGAAAAGGTGCAATCTTTCTTTGCTGCAGTGAAAGCATTGTCACGTAAAGAAGTGCACTATGGGGCTCATGCAACATCAGAGCAGGTCATTGCAGCCGGTGATCTTTGTGCCATTTGTCAAGAGAAGATGCATGCCCCAATCTTACTTCGTTGCAAACACATTTTCTGTGAAGACTGTGTATCAGAGTGGTTTGAGAGGGAAAGGACCTGCCCTTTGTGCAGGGCTTTGGTAAAACCTGCAGACCTTAGGTCATTTGGTGATGGTTCTACTAGTTTGTTTTTCCAGTTATTCTGA 1293 0.4462 MEGNGDMFRSSPVAGASSSSRRYGFPSAASIIQAPLSALLEYSGILPARSNQQPHQPIPDSVPNDGEVSIRIIGSNEQDNHREEEGSSVVTNDGGGVAAMTSNGDVEGASRTGSGNVDAEAGGGGDIGANGRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKMPVLIGISVAFALHVIGVYWWYQNDDLMYPLVMLPPKEIPPFWHAIFIIMVNDTLARQAAMVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGAHATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2531 430 MobiDBLite consensus disorder prediction 1 24 - -
Mal3g2531 430 SUPERFAMILY RING/U-box 360 412 - -
Mal3g2531 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 343 417 IPR013083 -
Mal3g2531 430 SMART ring_2 369 406 IPR001841 -
Mal3g2531 430 CDD RING-HC_RNFT1_like 368 407 - -
Mal3g2531 430 ProSitePatterns Zinc finger RING-type signature. 384 393 IPR017907 -
Mal3g2531 430 Pfam Zinc finger, C3HC4 type (RING finger) 367 410 - -
Mal3g2531 430 ProSiteProfiles Zinc finger RING-type profile. 369 407 IPR001841 -
Mal3g2531 430 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 4 430 IPR044235 GO:0061630|GO:1904294
Mal3g2531 430 MobiDBLite consensus disorder prediction 75 129 - -
Mal3g2531 430 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2531 Mal-Chr3 97294340 97298692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2531 1 430 C3H Transcription Factor Family AT5G01960 70.000 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2531 - K22379 gmx:100818546 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2531 3 97294340 97298692 Mal3g2531 3 97294340 97298692 ECH