Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2504 ATGGCTTCCATACTATCTACAACTACACTTCAACATACTCATAATAAAATATGTTTCTCTCCTCTAAAACTCACCACCCCATTTAACAATTCTTTCTTTACAAGAAACCATTTCAACAAAAAATATTCTACAAGGTGCAAAGCATTTTTTGATATCATCCCCAAAGATTTATTATTGAACAATACATTTTATTTGGATAAGTTTCAGAGTGTGAGTGAGGATTTATCAGACATGCAGAGGTTGGAGATTTTGCTCTTTGTTGGGTTGACATGGTTTTACCTAACTGCAAGACCAGGTGTTCTTTTTGGTGCTGTTGATGCATACATTTTCGCTCCAATGCAATTTGTTTTGGATAGTTTATCTGGAAGGAGAAACATGAAGAGAAGTGATTTCTTGATTGGTGGTAAGATAGGAGAAGGGTCATTTGGTGTTGTTTATTCTGCTGTTTTGGTAACAAAGGATGTGAAAGAGATGATGCTGAAGAGTGGAAGAGGCAAGTTGGATGCTAAATCTAAGGATAAAGTCATTCTTAAAAAGGTGAAGGTTGGCATTGAAGGTGCTAAAGAATTTGGTGATTGTGAAGAGTGGTTCAATTATAGACTCTCCAGAGCAGCTCCTGAAACATGTGCCAAGTTCCTTGGAAGTTTTATAGCTGATAAAACCAATTCACAATTCACAAAAGGGTTGTCCATATCACAGGGAGACCGCACTCTTGCTGATTACATGACAGATAAAAACTTCCCTTCAAATTTAGAATCTGTCATGTTTCGAAATGCGTTGCAAGGTGTTGACTCTTCTAAAAGAAATGCAATGATCATCAAGCAAATAATGCGCCAAATCATTACATCTCTTAAGAAAATTCACGACACCGGCATTGTTCACAGGGATGTAAAGCCTTCCAACTTGGTTGTTACAAAAAAAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACCTTAGAATTGGAAAGAATTATGTTCCTAATTATACACCTTTGGATCCTGATTACTGTCCTCCTGAACTATATGTTCTACCACAAGAAACACAAAGTCTTCCTCCAGAACCAATTGCAGCTTTGCTTTCACCAATCTTGTGGCAGTTAAACAATCCTGATCTCTTTGATATGTACTCTGCTGGAATTGTACTCTTGCAAATGGCAATACCAACCTTAAGGTTTCAAGCTGCTTTGATGAACTTCAATTTGGAAATGAGAACATGTGGATATGATTTGAACAAATGGCGGGACTCTACTCGCATGAAGTCTAACTTCCAAATCCTTGATAGTGATTCTGGTAGAGGCTGGGACTTAGCATCAAAGCTTATCTCCAAAAGAAGTTCCGAAAGAAGAAAGCGTTTATCCGCTGCTTCTGCTTTGAGGCATCCTTATTTTCTTCTTGGTGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTCAGCTTTAGCACAAAGTGA 1455 0.3794 MASILSTTTLQHTHNKICFSPLKLTTPFNNSFFTRNHFNKKYSTRCKAFFDIIPKDLLLNNTFYLDKFQSVSEDLSDMQRLEILLFVGLTWFYLTARPGVLFGAVDAYIFAPMQFVLDSLSGRRNMKRSDFLIGGKIGEGSFGVVYSAVLVTKDVKEMMLKSGRGKLDAKSKDKVILKKVKVGIEGAKEFGDCEEWFNYRLSRAAPETCAKFLGSFIADKTNSQFTKGLSISQGDRTLADYMTDKNFPSNLESVMFRNALQGVDSSKRNAMIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKKGQIKLIDFGAATDLRIGKNYVPNYTPLDPDYCPPELYVLPQETQSLPPEPIAALLSPILWQLNNPDLFDMYSAGIVLLQMAIPTLRFQAALMNFNLEMRTCGYDLNKWRDSTRMKSNFQILDSDSGRGWDLASKLISKRSSERRKRLSAASALRHPYFLLGGDQAAAVLSKFSFSTK* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2504 484 Pfam Protein kinase domain 269 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2504 484 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 4 482 IPR044803 GO:0004674|GO:0009579
Mal3g2504 484 Gene3D Phosphorylase Kinase; domain 1 120 235 - -
Mal3g2504 484 SMART serkin_6 131 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2504 484 Gene3D Transferase(Phosphotransferase) domain 1 257 467 - -
Mal3g2504 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Mal3g2504 484 SUPERFAMILY Protein kinase-like (PK-like) 128 466 IPR011009 -
Mal3g2504 484 ProSiteProfiles Protein kinase domain profile. 131 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2504 484 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 4 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2504 Mal-Chr3 96900243 96902993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2504 279 397 AGC Kinase Gene Family AT5G04510 30.328 1.63e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mal3g2504 Pkinase 2.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2504 - - gmx:100795624 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2504 3 96900243 96902993 Mal3g2504 3 96900243 96902993 ECH
Mal5g0018 5 396092 398430 Mal3g2504 3 96900243 96902993 PCT