Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2498 ATGGAAAATCTAGGTCATGGTGGTCGTGGAAAGGTAATTGATGAGTTGGTAAGAGGGCGTGAACTTGCAAACCAACTTAGAAATATTCTCAATGAAAGTGGTGATTTTGATAATAATGATGGATCAACACTACCATTTGCTGAAGATCTATTAAAAGAAGTGCTTACCACCTTTACTAATTCTCTTTTGTTCTTGAAGAATAATCCTACTTCAGATGTCTCTGATTTGCAACTTACCAAATCTGAAGATTCTTTGGAAAGTAATTGCAAGAGTATTTCCATTGCTAAGGAAAGAAGAGGCTGTTACAAAAGAAGAAAAGTTGCACAAACATGGGAGAAGGAGTCTGAACATCCAGAGGAAGATGGTCATCAATGGAGAAAGTATGGGCAAAAAAAAATCTTGCACACCGATTTTCCAAGGAACTACTACAGGTGCACTCACAAATTTGATCAAGGTTGCAAAGCAACAAAGCAAGTCCAAAGAGTTCAAGAGGATCCACCTCTTCACAAGACAACCTACTATGGTCATCACACTTGTAGAATCTTGCAAAATCCTGAGATCATAGTGGATTCTCCTTCTGATCACTCTTCCATGTTCCTTAGCTTTGACAACACTTTCCCAACACCAGCCAAACAAGACTGCCCTTTTCTCTCATCTTCTTCTCATCCATCAACATCATCATCAGTGAAAAGAGAATTTAAGGATGAGATTGTTCATCCTCCTCCTCCTTCAAATGATTACCTCTCTGGACTCACTTTTGAGGATTCAGAAAAGGATGTCACACTATCATCAACACTTGATTCTCATGATCACTTAGGTGTTGATATTCCTGATATCTTGTATGATGATGTCCTTAATTGGCCTCTTCCTTGA 873 0.386 MENLGHGGRGKVIDELVRGRELANQLRNILNESGDFDNNDGSTLPFAEDLLKEVLTTFTNSLLFLKNNPTSDVSDLQLTKSEDSLESNCKSISIAKERRGCYKRRKVAQTWEKESEHPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKFDQGCKATKQVQRVQEDPPLHKTTYYGHHTCRILQNPEIIVDSPSDHSSMFLSFDNTFPTPAKQDCPFLSSSSHPSTSSSVKREFKDEIVHPPPPSNDYLSGLTFEDSEKDVTLSSTLDSHDHLGVDIPDILYDDVLNWPLP* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2498 290 Pfam WRKY DNA -binding domain 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2498 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 284 - -
Mal3g2498 290 ProSiteProfiles WRKY domain profile. 114 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2498 290 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2498 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 284 IPR044810 GO:0003700
Mal3g2498 290 Gene3D WRKY domain 103 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2498 290 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2498 290 MobiDBLite consensus disorder prediction 213 227 - -
Mal3g2498 290 MobiDBLite consensus disorder prediction 213 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2498 Mal-Chr3 96817538 96819383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2498 11 232 WRKY Transcription Factor Family AT3G56400 37.975 8.90e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g2498 WRKY 9.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2498 - - mtr:MTR_7g073430 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2498 3 96817538 96819383 Mal3g2498 3 96817538 96819383 ECH
Mal3g2498 3 96817538 96819383 Mal5g0022 5 415380 416816 PCT