Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2486 ATGACCTTTAATACTCCTTTTGGAAATTCAAATTCCTGTGGTAGTGTTGTTGTTAGTGAAAAGCAACAAACTGAAAATTCAATTCCAAATCTCTCAGAGACAGAGCCTAAGTCTCACAATCTTTTGCACAAGCTGTCTATGTCAACTCTTGATACAAAGTCAGAGAAAAATGTGTGCATGGCATCTCCAATTCATCATGCTGCGAGGAAATCTCCTATAAGACGACAGAGGAAACACATATCTCCGCGTAATTTGCCTAAGATTACTGATCAAGAATTGCAGCAATTATCCGGAGAGTATCCATCCATTACTTTGCTAAATTTTTCATTTTTAAACTCCACCATTGTGCCACTATTTGAGAAGACATTGACTGCTAGTGATGTTGGCCGACTTGGTCGCATGGTTCTTCCAAAATCATGTGTTGAAACATATTTTCCACCTATTTCTCAACCAGGAGGCATTTATTTACAAATCGAAGACGTAAAAGGGAAGAAATTGGTGTTTAAATTTAGGTTTTGGCCAAATAATAGCAGCAGGATATATGTTTTAGAAGGTGTACATCCTTGGATTCAGTCTATGCAATTGCAAGTTGGAGATTTTGTAACATTTAGCAGAATGGACCCCGGGGAGAAACTGATAATAGGGTTTCGAAAGGCATCAATTTCTTCTATGCAGGTGAGTAACATTACTATGTCTAGAGGCATGAAAAGAGAGAGAATGTGTTTGCCACAAGAGCTAGTTCCTAAGAAGAAAAGAACAATTGATAATGAGTCAAAAAGTAAGAGGTTGCTTATTGATAACCAAGATGCATTGATGCTGAAACTTACTTGGGAAGAAGCTCAAGATTTTCTTCATCCACCCCCAACAGTTAAATCAAACATTGTGGTGATTGAGGATCATGTTTTTGAAGAATATGAAGAACCTCCTATCATTGGAAAGAGGGGTATATTCATAAATGGGATGAACGAGCAATGGATACAGTGTGATAAGTGCTCAGAATGGAGAAAGTTGGGATATGTGGAGAAGTTATGGGATCAAAGAAGCAGGTGTTCATGTTCTGCTCCCATGAATTGA 1074 0.3799 MTFNTPFGNSNSCGSVVVSEKQQTENSIPNLSETEPKSHNLLHKLSMSTLDTKSEKNVCMASPIHHAARKSPIRRQRKHISPRNLPKITDQELQQLSGEYPSITLLNFSFLNSTIVPLFEKTLTASDVGRLGRMVLPKSCVETYFPPISQPGGIYLQIEDVKGKKLVFKFRFWPNNSSRIYVLEGVHPWIQSMQLQVGDFVTFSRMDPGEKLIIGFRKASISSMQVSNITMSRGMKRERMCLPQELVPKKKRTIDNESKSKRLLIDNQDALMLKLTWEEAQDFLHPPPTVKSNIVVIEDHVFEEYEEPPIIGKRGIFINGMNEQWIQCDKCSEWRKLGYVEKLWDQRSRCSCSAPMN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2486 357 SUPERFAMILY DNA-binding pseudobarrel domain 116 219 IPR015300 -
Mal3g2486 357 SMART B3_2 119 220 IPR003340 GO:0003677
Mal3g2486 357 CDD B3_DNA 117 218 IPR003340 GO:0003677
Mal3g2486 357 Gene3D - 86 222 IPR015300 -
Mal3g2486 357 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 15 355 - -
Mal3g2486 357 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 15 355 - -
Mal3g2486 357 MobiDBLite consensus disorder prediction 1 38 - -
Mal3g2486 357 ProSiteProfiles B3 DNA-binding domain profile. 119 220 IPR003340 GO:0003677
Mal3g2486 357 Pfam B3 DNA binding domain 119 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2486 Mal-Chr3 96582772 96585284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2486 16 355 B3 DNA Binding Superfamily AT4G32010 44.737 1.46e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g2486 B3 2e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2486 - - mtr:MTR_7g073240 580.482