Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2484 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAGAAGTCTGATTCGTTTGCCTATGTAAAACGCCTAAGCCATAACGAGCATGCACCTTCTGTACTTCCTGAACCTCAAACTCATACTCGCTCACTACAGTCTGCACCTCCTAGTTTTAGAACCAGAGTGAAACCAATTCAACCTGTTAATAAAGTCACTAACAATAGAATACGGGCATTATCTGCTCCATCGACTCTTGATGCAGCAGATCAAGATGCTTTGGCCTCAATTGAGTATGAAGAACAAGAAGAATTAAAACACCGAGGAGGAGGATCAATGAAGGAGCTGCGTTCTTCTAGTCCACAACCTTTACCACTTCCATCTCCTCAGGGAGGTAGTTCACTTAAGGCTATTGGCAGCTTTAAGTTGGGGAATGCTAGTGGTCCTCTACATGCTTCTGGTCCTTTGCCGCTTCCACCTACTGGTTCACTTCGGAACTTTCTGTATGAGGAAATCGCTGCTGCTTGCCACAATTTCTCTTCTGATCGATGCATGTCAGAATGTCTTTCGTCCACCATATACAAAGCTTACTTTGGTGATGATCCTTCAAGTGCAAAGAAGTTTGAAGCCACTGTCACACGCCTTCACCCATCATCTCAGGGTTTGAAGGAATTCATAAACGAGGTTAATACTCTCGCAACTTTGCAACATCCAAACCTCTGCAAATTGCTAGGATTTCACGCACGTGATGGATCAGAACACAAAATGTTGGTCTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTTTTGTATGGTAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCACATGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAACGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCTAAGCTTTCCGGATATGGTTGTGTTGGTCATATTCCTGAGGAAGAGATTTCCAGCAGTTCATCCGCTGTTGGAAACCTATCAATGGAGACGCTGGAGAAAGGAATGCTGACCCCAAAAAGCAATGTGTGGAGCTTTGGAATTTTTCTTTTGGAGTTACTTACCGGAAGAAAGAATCTTGATAGCCGTCACCCTAAGGAAGAGAGGAATTTAGTCAAATGGAGCAAGCCTTTCCTAGCCGATAATTGTCGTTTATCGCTGATCATGGACCCTCAACTTAAAGGCCGCTTTCCTTCTAAAGCAGCAAGAACAATAGCCGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCTGATAGACCCACCATGAGAACTGTCGTTGAGCATCTCAAAACGATACAAGATATGAAGTACTCTTGCAGGTTTCCACTACAAGAACCAGCGCCTTTATCTGGAAAAGAAATGTTGAGATCGCCAAGTCTTAATGGTATCATCTGCCCTGCGCCAAGGTTGAGTTACTCTCCATCCCGGCCATCGGTAGCCCCGATACCAATTTCGCCTCCGAGATGGTCCGGGGTGCCCGTCCTTCCGCCTCGAGCATGTTCTTCTACTCTCTCATTGGTAGAGCTTGACAGGCAAGAAAGCCGTAAGTCATCATCCTCAGCCTCTAGGAGGGCCAGTGTTGAAGGATTTTGA 1641 0.4479 MGCFTVLKSKKKKSDSFAYVKRLSHNEHAPSVLPEPQTHTRSLQSAPPSFRTRVKPIQPVNKVTNNRIRALSAPSTLDAADQDALASIEYEEQEELKHRGGGSMKELRSSSPQPLPLPSPQGGSSLKAIGSFKLGNASGPLHASGPLPLPPTGSLRNFLYEEIAAACHNFSSDRCMSECLSSTIYKAYFGDDPSSAKKFEATVTRLHPSSQGLKEFINEVNTLATLQHPNLCKLLGFHARDGSEHKMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAHGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSKPFLADNCRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKTIQDMKYSCRFPLQEPAPLSGKEMLRSPSLNGIICPAPRLSYSPSRPSVAPIPISPPRWSGVPVLPPRACSSTLSLVELDRQESRKSSSSASRRASVEGF* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2484 546 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Mal3g2484 546 Gene3D Transferase(Phosphotransferase) domain 1 253 457 - -
Mal3g2484 546 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Mal3g2484 546 MobiDBLite consensus disorder prediction 93 129 - -
Mal3g2484 546 PANTHER OS01G0822200 PROTEIN 44 545 - -
Mal3g2484 546 MobiDBLite consensus disorder prediction 31 51 - -
Mal3g2484 546 MobiDBLite consensus disorder prediction 25 61 - -
Mal3g2484 546 SUPERFAMILY Protein kinase-like (PK-like) 149 457 IPR011009 -
Mal3g2484 546 MobiDBLite consensus disorder prediction 522 546 - -
Mal3g2484 546 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2484 546 PANTHER OS01G0588500 PROTEIN-RELATED 44 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2484 Mal-Chr3 96554309 96556768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2484 149 449 Receptor kinase-like Gene Family AT4G02010 38.111 1.41e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Mal3g2484 PK_Tyr_Ser-Thr 9.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2484 - - gmx:100809117 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2484 3 96554309 96556768 Mal3g2484 3 96554309 96556768 ECH
Mal3g2484 3 96554309 96556768 Mal7g0456 7 12012420 12015047 PCT