Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2481 ATGAAACGCCGTTTTCTCGACACAGAGATGAGTATGCCACCATCATATGAAAACAACACAAGCGACTCATTCATCAACGTCGAAAATTTCGACACAAACATGGTAATCATATTAGCAGCACTATTATGCGCATTGATATGTGCTCTAGGGCTGAACACCATAGCTCGTTGCGCCATGCGATGCAGCCGAAGATTCTCCGATGAAACACCGGAACAAGCTACAACGAGGTTGAACAAAACAGGGCTGAAAAAGCGTGAACTGAGACAAATTCCGGTGACGGTTTACGGTGGTGCCGGAGAGAATATTCCGGCGACGGAGTGTCCTATTTGTTTAGGGGAGTTTGAGAAAGGTGACAAAGTTCGAATGTTACCAAAGTGTAATCACGGGTTTCATGTTAGGTGTATTGACACGTGGTTAGTGTCACATTCTTCGTGTCCAAATTGTAGGAATTCACTTCTTGTTGAGAGAGAATCCAAAGCTACGGTTGCCGGAGATGGGTTGCCGGAAAATGTTGCGGCGGTGATTGTTGAGGTGGAGGCAAGTTGA 546 0.4579 MKRRFLDTEMSMPPSYENNTSDSFINVENFDTNMVIILAALLCALICALGLNTIARCAMRCSRRFSDETPEQATTRLNKTGLKKRELRQIPVTVYGGAGENIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLVSHSSCPNCRNSLLVERESKATVAGDGLPENVAAVIVEVEAS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2481 181 PANTHER RING-H2 FINGER PROTEIN ATL74 1 162 - -
Mal3g2481 181 SMART ring_2 107 148 IPR001841 -
Mal3g2481 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 158 IPR013083 -
Mal3g2481 181 Pfam Ring finger domain 106 149 IPR001841 -
Mal3g2481 181 SUPERFAMILY RING/U-box 106 154 - -
Mal3g2481 181 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 162 - -
Mal3g2481 181 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Mal3g2481 181 CDD RING-H2_EL5_like 106 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2481 Mal-Chr3 96541809 96542354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2481 4 163 C3H Transcription Factor Family AT3G10910 54.167 2.67e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2481 K19040 - gmx:100810195 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2481 3 96541809 96542354 Mal3g2481 3 96541809 96542354 ECH