Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2462 ATGTACAAGGGGAGATTCTGCACTTCTGGTGGGATTAAGGCCCCCCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGGCGTTTTAGGGACATTCTTGGCAGAGGAGCTATGAAAACTGTGTATAGAGCATTTGATGAATTCCTTGGGATTGAAGTGGCTTGGAACCAAGTCAAACTTGGTGATGTTTGTCATTCACCAGAGCAACTTCAACGCCTTTATTCAGAAGTTCATCTCCTTAAGCACCTCGACCATAAATCCATGATGATCTTCTATGGTTCTTGGATTGATATCATTGGCAAAACATTCAATTTCATCACTGAATTGTTCACCTCAGGCACCCTTAGAGAGTATAGGCAGAAGTATAAGAAAGTGGATAACCAAGCACTAAAGAATTGGGCACACCAAATTCTAAGTGGTTTGGATTATTTACACAACCATAATCCTCCTGTGATACATAGAGACCTCAAATGTGATAATATCTTTGTCAATGGCCATAAAGGGGAGGTCAAGATTGGTGACTTAGGTCTTGCAGCTATACTTTGTAGATCCCAACTTGCTCAAAGTGTCATAGGTACTCCAGAGTTCATGGCACCAGAACTGTATGAAGAGAAATACAATGAACTAGTAGATATATATTCCTATGGTATGTGTATGATAGAGATGCTTACTCTTGAGTTTCCATACAATGAGTGCTCAAACCCAGCTCAAATATACAAGAAAGTAACTGCGGGGAAGCTACCAAATGCATTTTTCAGAATCAAAGATTTAGAAGCCCAAAGGTTTGTGGGAAGATGTTTGTCCCATGTCTCAAAGAGACCAACAGCAAAGGAACTATTGTTGGACCCATTTTTAGCCATGGAACAACTTGAATTGTTATTACCAAGCACAACAATATCAAAAAATCAAACATTGAAGCATCTTTCTATAGGTGATCCAGCAACAACAAGTACAAATATGACAATCACCGGATCCATAAGTGAAGAGGATAACACAATTTTCCTTAAAGTGCGGTTATGTGATGAAATAGGGCAAACAAGGCATATATTCTTTCCATTTGATACAAAAAACGACACTGCTATTAAGGTGGCAATGGAGATGGTAGAAGAACTTGAAATTAATCACTTGGAACCATTAGAGATTGCTGCAATGATAGATAATGAGATATCAACTTTATTTCCAACTTGGATGGATACTCATGGCAAATGTGAGCATCAATTACAACATAGCTTTAACTATGTAGAAGATGATGATGTTAATAACCATAATCCTTTTGTTTTGTCATCATCTTGTCCGTCTTCACCTCATGATTCTCTCACCAAGTCTTACTCCAAGACCCAGTTCTGTGCGAAGCATGGCATGTTTCCTCATGAATGGAATCAAGATTTATTTATAAATGATGATGGAAGCTCTCCAAGCTCAATGAACTCCTACAAGTGTTCAAATATCCAATATCATGAAGATGAACATGGACCAACAATAGAAGAAGCTAGAGCCAAACATAAAAATCTAAAATGTATTAGATCAAGTCCTATAGAAGAGGGAGAAGCAAGTAACTTCACCAAACAATTATTGTATCCGAAAACGGACTTTTGTAATGGTTGTAGATGTGGTGGCCATGAGTTGAGCCATCGTGGATGGTCGAGGATAACTAAGAATCGTTCAAACATGGAAGATCATAGGAGTTTGCAGCTTCATCGATCGCAACTATTGGAGGAAGTGTACAAGAGACCGATGTTCAACACTATTGCCACTATGGAAGGCATTGGATTTCAATACCCAGATAGAGGAGGACGTCGCACTCGCTGA 1812 0.3896 MYKGRFCTSGGIKAPLGYVETDPSGRYGRFRDILGRGAMKTVYRAFDEFLGIEVAWNQVKLGDVCHSPEQLQRLYSEVHLLKHLDHKSMMIFYGSWIDIIGKTFNFITELFTSGTLREYRQKYKKVDNQALKNWAHQILSGLDYLHNHNPPVIHRDLKCDNIFVNGHKGEVKIGDLGLAAILCRSQLAQSVIGTPEFMAPELYEEKYNELVDIYSYGMCMIEMLTLEFPYNECSNPAQIYKKVTAGKLPNAFFRIKDLEAQRFVGRCLSHVSKRPTAKELLLDPFLAMEQLELLLPSTTISKNQTLKHLSIGDPATTSTNMTITGSISEEDNTIFLKVRLCDEIGQTRHIFFPFDTKNDTAIKVAMEMVEELEINHLEPLEIAAMIDNEISTLFPTWMDTHGKCEHQLQHSFNYVEDDDVNNHNPFVLSSSCPSSPHDSLTKSYSKTQFCAKHGMFPHEWNQDLFINDDGSSPSSMNSYKCSNIQYHEDEHGPTIEEARAKHKNLKCIRSSPIEEGEASNFTKQLLYPKTDFCNGCRCGGHELSHRGWSRITKNRSNMEDHRSLQLHRSQLLEEVYKRPMFNTIATMEGIGFQYPDRGGRRTR* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2462 603 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Mal3g2462 603 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2462 603 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2462 603 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2462 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 597 - -
Mal3g2462 603 CDD STKc_WNK 26 286 - -
Mal3g2462 603 Gene3D Transferase(Phosphotransferase) domain 1 111 291 - -
Mal3g2462 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mal3g2462 603 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Mal3g2462 603 PANTHER WNK KINASE 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2462 Mal-Chr3 96206952 96212408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2462 16 419 MAP Kinase Kinase Kinase AT3G51630 63.133 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal3g2462 Pkinase 8.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2462 K08867 - gmx:100272206 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2462 3 96206952 96212408 Mal3g2462 3 96206952 96212408 ECH
Mal3g2462 3 96206952 96212408 Mal7g0908 7 24966395 24971968 PCT