Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2459 ATGGGAAATTATAGGTTCAAATTGTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACCAACAACACAACAAAGGAAGAAAAAGCAACCTTCAAGTTCAACAACCTCAAACACATCAAAATTAAAGCAACCCCACCAAACAAATCCAAGAAAATCTTACTACTTTACAAGGGAGCTTAACCAAACAAGCAATAGAATCTACAACACTTCACCACCAAACAACACAAATTTTCCACCTGAACCACCAAGAAAATCATCATCAAAATCAAAAAGACCAAAAAGAAGAACACCAAAAACTTCATCATCATCATCTCCACTTGATAGCTCTGCAGAATCAGAAGAACTCACTGACCCAGAAATCAGAACAGACCGTGTTCTTCTTCCAACAAATGACATCATAATCGATGTTGACAACAATTCTATCATTGCTACAAGAAAAGATGATAAGCTAAATGAGTATGATTCACTATCAGAACTCATGAAACTTCCACCAATTGTGACTAAACCAGAAAAGTTCAACTACTTGTTAAACTATACAAAGAAGAAAGAAACAAAACCCAGAAGCAAAAATTCATCAAATGATGAACACAACGTAAAAGGGTCACTAAAAGTCAAGATTTTGAAGGAAGAACAGAGGAACATCAACACAAACACACCAAGTAGAAGATTTTCTGTTAGTTCACCAAGTGTGAAACTTAGGATCAATTCACCAAGAATTTCAAGCAGGAAAGTTCAAACACATGGCCGGAAAAGCGTGTCATCCGGTTCCGGTAACCGGAGAAGCCTTTCGGATAGTTTCGCAATTGTGAAGTCATCAATGAATCCACAGGGAGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAAAACAACATTAGAACATCAAAGGATTTAGAAGATCTTCTTGCTTGTTATCTTTCATTGAATTCAGATGAGTATCATGAACTAATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1029 0.3576 MGNYRFKLSDMMPNAWFYKLRDMGRTRNQTPTTQQRKKKQPSSSTTSNTSKLKQPHQTNPRKSYYFTRELNQTSNRIYNTSPPNNTNFPPEPPRKSSSKSKRPKRRTPKTSSSSSPLDSSAESEELTDPEIRTDRVLLPTNDIIIDVDNNSIIATRKDDKLNEYDSLSELMKLPPIVTKPEKFNYLLNYTKKKETKPRSKNSSNDEHNVKGSLKVKILKEEQRNINTNTPSRRFSVSSPSVKLRINSPRISSRKVQTHGRKSVSSGSGNRRSLSDSFAIVKSSMNPQGDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDLTDN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2459 342 MobiDBLite consensus disorder prediction 26 84 - -
Mal3g2459 342 ProSiteProfiles OVATE domain profile. 279 338 IPR006458 -
Mal3g2459 342 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 342 - -
Mal3g2459 342 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 278 340 IPR006458 -
Mal3g2459 342 MobiDBLite consensus disorder prediction 26 133 - -
Mal3g2459 342 Pfam Transcriptional repressor, ovate 283 339 IPR006458 -
Mal3g2459 342 MobiDBLite consensus disorder prediction 247 272 - -
Mal3g2459 342 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 342 IPR038933 GO:0045892
Mal3g2459 342 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2459 Mal-Chr3 96158534 96159562 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mal3g2459 Ovate 3.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2459 - - mtr:MTR_7g072875 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2459 3 96158534 96159562 Mal3g2459 3 96158534 96159562 ECH