Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2447 ATGACATCTTTAAATGTTGTTTGGAAGCCAAAAATAGGAATGGGGTTTGATAATATGGAGGATGCTTATCAATTTTGGCTTGCTTACAGTGTACGTGTGGGCTTCGGAGTTAGAATACGTTACACAAACAAGAAGGGAGACGATAGTATATCGTCATGTAGAATGGTTTGTTGTAAGGAAGAAGTAAAGAGAAAAGAGAAAAGAGGTGCATATGAAGGAAAATTTCAGAGAGCCGAGACTAGAACAAATTGCCCTGCAAGAATTACACTTTCATGTAAGAATGAAAAGTTAGTGATCCATGAGTTTGTAGAGTACCATAACCATGACCTGCAAAAACCAGAGACAACACACATGCTTCGATCGCATAGAAAGATAACCGAAGTACAAGCATATGAGATTGATATGGCCGATGACTCAGGATTAAGGCAGAAGGAAACATTTCAACTTATGAGCACACATGCAGGGCATAGCTCTAATGTTGGATTTACACAAGTGGATGTAGGAAACTACATCACTACAAGAAGACAAAGAAGTATGGTTCAGAACCTATTTTGTTCCAACACATTCTTTCATGCATATCAGATGGATATAGAAGAACAAATTACAAATGTGTTTTGGTGTGATGCAAATATGATTTTGGATTACGGGTATTTTGGTGATGTTGTTTCATTGGACACTACATACTGTACCAACCATGCCAATAGACCACTTGCTTTGTTTTCTGGTTTCAACCATTATAGAGGCTCAATCATTTTTGGTGCAGCACTAATGTATGATGAGACAATTGAGTCATTTAAATGGTTGTTTGATACATTCTTACAAGCACACAACAACAAAAAACCAAAGACTATCTTCACTGACCAAGATCAAGCAATGGCTAGCGCACTTGCAAAAGTGATGCCTGAGACTCACCATGGTTTATGCACATGGCACTTGTTGCAAAATGGAATTAAACATCTTGGGAACTCGATGAAGGGAGGATCTTTTTTGCTAAGAGATTTCAAAAAATGCATGTATGATATTGACATTGAAGCAGATTTTGAGAAAGCTTGGTTTGACTTGATCAACGAATATGATCTTCATGATAAAACTTGGATCAAGTCAGTTTATGGCATTAAAAAAAAATGGGCTGCATGTTATATGAAGGAAGTGTTAACACTTGGCATGCGAAGTACACAAGTTAGTGAAAGTTTGAATGCTCACTTCAAATCTTGTATGAAGCCGAGTGTGGATATCCTACAATTCTTCAAACATTTCGAAAGAGTTGTTGAGGAAAAGAGAGAAAAAGAATTGAAATCTGAGTATGAATCCTCACATAAGCTTGCAAGGTTAGCATATGAAACTTCACCAATACTAATCCAAATGGGAAAAGTATACACACACACTGTATTTGAGTTCTTTCAATACGAGTTTAAGTTATTCTTAGCTTTATCTATATCAGCGAGACGTACAGAATCTGACTCTTTTTGTGAATATTTCATCACTATGGGGAACCATGAAAGATCTTGGAGAGTGTCATTTGATCGTGCTTCAACATTCGTTACTTGTAGTTGTAGGAAGTTTGATACATTTGGCATACTTTGTTCACATGCTTTAAAAGTGTTTGAATTGAATGATGTTAAGGTAATTCCTGAGAAGTATATTTTAAGAAGGTGGACAAGAGAAGCCCGTTGTGGCGTTGTGCAAGATTTTAGGGGAATGGATGTTGAACGAGATCCAAAGTTGTCTAGAAATCGAATGTTTAGACAAGTTGTCTCTAAGTTCATTAGAGCAGCAAGTCAGGCTTCACCTAGTGAAGAGTGCCTCAAGTTTGTTGATAAAAGTGTAGATGAAATGCTCAAGAAAATAATGGAATTTCCTGCACAAGCTAAAGACATTGACGGTGATAACAGTGATCATCCGACATTTATGATATTGGATTCGACTAACCTTCATTCGACTAAATCTGATTCGACTGCTTGTCGTGCTCGACTAACAACTTTAAATATTTTTAAGTGTAAACAAACACACATGCGTGTGTGTATATATACACACACTAGTTGGATTTTTGCCCACTGTGTATTTACCGCTCCATCGCCAATATACCTTAATCCGATCACTATGCGTGTTGCCGTAGTCAACTCCGAATCAATTTCACTGTCGTCCTTTTTAATAAGATAG 2160 0.3704 MTSLNVVWKPKIGMGFDNMEDAYQFWLAYSVRVGFGVRIRYTNKKGDDSISSCRMVCCKEEVKRKEKRGAYEGKFQRAETRTNCPARITLSCKNEKLVIHEFVEYHNHDLQKPETTHMLRSHRKITEVQAYEIDMADDSGLRQKETFQLMSTHAGHSSNVGFTQVDVGNYITTRRQRSMVQNLFCSNTFFHAYQMDIEEQITNVFWCDANMILDYGYFGDVVSLDTTYCTNHANRPLALFSGFNHYRGSIIFGAALMYDETIESFKWLFDTFLQAHNNKKPKTIFTDQDQAMASALAKVMPETHHGLCTWHLLQNGIKHLGNSMKGGSFLLRDFKKCMYDIDIEADFEKAWFDLINEYDLHDKTWIKSVYGIKKKWAACYMKEVLTLGMRSTQVSESLNAHFKSCMKPSVDILQFFKHFERVVEEKREKELKSEYESSHKLARLAYETSPILIQMGKVYTHTVFEFFQYEFKLFLALSISARRTESDSFCEYFITMGNHERSWRVSFDRASTFVTCSCRKFDTFGILCSHALKVFELNDVKVIPEKYILRRWTREARCGVVQDFRGMDVERDPKLSRNRMFRQVVSKFIRAASQASPSEECLKFVDKSVDEMLKKIMEFPAQAKDIDGDNSDHPTFMILDSTNLHSTKSDSTACRARLTTLNIFKCKQTHMRVCIYTHTSWIFAHCVFTAPSPIYLNPITMRVAVVNSESISLSSFLIR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2447 719 SMART 26again6 514 541 IPR006564 GO:0008270
Mal3g2447 719 Pfam MULE transposase domain 221 315 IPR018289 -
Mal3g2447 719 Pfam SWIM zinc finger 514 536 IPR007527 GO:0008270
Mal3g2447 719 PANTHER OS03G0181600 PROTEIN 7 625 - -
Mal3g2447 719 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Mal3g2447 719 ProSiteProfiles Zinc finger SWIM-type profile. 503 539 IPR007527 GO:0008270
Mal3g2447 719 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 625 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2447 Mal-Chr3 95837288 95854522 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g2447 MULE 2.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2447 - - cam:101507984 912.909