Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2444 ATGGATGATCCCATTGATATTCCATCCACTGTGGTACCTCATAATGCATCTCAAACACCTCCAAATGGGGTGCCAAGGAATTCACCCATGGTTGAACCTCCGGTTGTTACACCTGAATGGGAGCCTTCTCCTCCTCCTGCTCCTCATTCTTCTCCTGTTGTCGATCCTCCAAATGCTGGAGCTATTGTTGTAATTCCTCCCGTTCAGGTGCCAGCACCAATCGTGGAAATTTCTATTGATCATAGGGAGGTATTTACCACCAAAACAAAGTTTCAAACGCGGAATGAGTTAATGGATTGGGTTCGCAAAGAAGCTAGGAAGCTAGGATTTTCTGTTGTTATTGGAAAATCCGACAATGGTGGAAATGGAAGAAATGCTTTTGTTACTTTGATATGTGAGAGAGGCGGTACATATACCGAGTACAACAAGCTGCAGAAGCGGAACAAAATTGCTGGTTCGGTGAAATGTGGGTGTCTGTTTCGCTTGAGAGGTTATTTGTTGATTGCCGGTTATTGGAGCCTTAAAGTGAATGACGGAAAACACAACCATGACATGGCGGAAATGTTGAAAGGTGATAAAACTGCTGGAAGGCTAAATCCAAATGAAAAGGATATGCTTTGTAACTTGACTGATTCCAATGTTCATCCAAGACACATTCTCACCTCTTTAAGGAAAAGGAACAGCAAAACGGCAAATACCATCAAGCATATCTACAATGCACGTACACGGTATAGGAAGTCAGTTAGGGGTTCTAGATTAGAGATGCAGCATTTGATGAAGTCTTTGAATGAGCATAAGTATTTCTACCATGTTAGGAAGTATGCTAATTCCCAAAACATCAAAGATATATTTTGGGCGCATATGGAATCCATCAAGTTGTTTAACACGTTCCCTACCGTGTTAATTATGGATTCCACCTATAAGACTAACAAATACTGTCTTCCGTTGCTTGAGTTTGCTGGTGTCACTTCTACCTACTTGACGTATTCTATTGCATTTGCTTATATGATGTCCGAGAAGGAAGAAAGCGTCACTTGGTCTCTTGAAAAATGTCGAGGCTTGTTCAAATCTGTGAATATGTCACCCGAAGTCGTTGTCACTGACCGAGACAATGCTTTGATGAAAGCTGTCGATGAAGTCTTCTCAAAGGCCACAACTTTGTTGTGTGAGTATCACATAGGGAAGAATGTTAGAGCGAGGTGTAAGACGGATTGCAAAGTGAAGGAAGGGTCAAACATCAAACCCATGGAAGTGGTGAATGGAATAATGGATGTTTGGGAGGCAATTATTTTTTCTCAAACGAAGCAGAAGTATGTGGATAATTGTATGCAGTTGAAAACAGCATGCGCCAACTTTCCCAAGTTCTTGGAATACGTTGAAACCACTATTTTGGGACCAGTGAAGGAGAAGGTTGTGCGGTTTTGGACCAACCGAGTCATGCATCTTGGGAACACAACGACAAACTGA 1467 0.4199 MDDPIDIPSTVVPHNASQTPPNGVPRNSPMVEPPVVTPEWEPSPPPAPHSSPVVDPPNAGAIVVIPPVQVPAPIVEISIDHREVFTTKTKFQTRNELMDWVRKEARKLGFSVVIGKSDNGGNGRNAFVTLICERGGTYTEYNKLQKRNKIAGSVKCGCLFRLRGYLLIAGYWSLKVNDGKHNHDMAEMLKGDKTAGRLNPNEKDMLCNLTDSNVHPRHILTSLRKRNSKTANTIKHIYNARTRYRKSVRGSRLEMQHLMKSLNEHKYFYHVRKYANSQNIKDIFWAHMESIKLFNTFPTVLIMDSTYKTNKYCLPLLEFAGVTSTYLTYSIAFAYMMSEKEESVTWSLEKCRGLFKSVNMSPEVVVTDRDNALMKAVDEVFSKATTLLCEYHIGKNVRARCKTDCKVKEGSNIKPMEVVNGIMDVWEAIIFSQTKQKYVDNCMQLKTACANFPKFLEYVETTILGPVKEKVVRFWTNRVMHLGNTTTN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2444 488 MobiDBLite consensus disorder prediction 1 54 - -
Mal3g2444 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 150 488 - -
Mal3g2444 488 MobiDBLite consensus disorder prediction 11 25 - -
Mal3g2444 488 MobiDBLite consensus disorder prediction 26 53 - -
Mal3g2444 488 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 150 488 IPR031052 GO:0006355
Mal3g2444 488 Pfam MULE transposase domain 300 396 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2444 Mal-Chr3 95775149 95776615 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g2444 MULE 9.4e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2444 - - mtr:MTR_1g099140 375.555