Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2429 ATGACACATTCAGATTTAAACTTAAGAAATGATGCTAGTGATTGGCCTTTGCCTCATGTCACTAACATTGATGAGTGGGTTCCTTTTGAAGGGCAAATTTTTGAAGATGATGAATATATGAATTCTTTAACATTTCAAGATCATCAACATGAACCCTTGCCTCAAGTCAATAGCATTGATGAACGGGTTCCTTTTGAAGGGCAAATATTTGAAACTCAAGAAGATGCTTATGAATTTTATTGTTTATTTTCTAAAAGAAATGGATTTTCTATTAGGCGTCATCATATATATAAATCTCGTAAAAACGAGTCTAAAGAGAATCCATCGGGTGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTGTTGGTAAACCACGCAAAACTGTTGAAGTGGGAAGTCAAAGGAAACGAAAATCTTCAAGATGTGATTGTAGTGCAAAGATGTTGGTTGCTAAGAGAACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTCAACAATTCTCACAACCATGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCCGCTTATCGTAACATTCCAATTGTTGATCAAAGTCGCATACTATTATTGTCCAAAGCTGGTTGCTCCGTAAGTCTTATAATGAGAGTGCTTGAGTTAGAGAAAGAAATAGGCACAGGAAATTTACCATTCTTAGAAAAAGATATCAGAAATTTTATGCAATCCCATAGTGATATTGGTAAAGAAAGCGATGCTTCAGATGTTCTCAAACTGTGCAAAAGTTTGAAAGATAAAGATGAGGCCTTCAGATATGAATTCACAATTGATGAAAGTAACAAATTGGAGCATATTGTTTGGGCATTTGGTGATTCAATTCGCGCATATGAAGCTTTTGGAGATGTTGTAGTTTTTGACACCACATACAGAATAAATCGTTATGAGATGCCACTTGGAATATGGAGTTTCCTAGCTTTTATGCAAGGAAAATATCCAAAAACCATTCTTACAGATCAAGATCTTGCAATTAAAGAAGACATTGCAATGGAATTGCCAAACACAAAACATGCATTTTGCATATGGCATATTGTCGCAAAGCTGTCAAGTTGGTTTTCTTTTCCACTGGGATCAAGATATGATGACTTTAAACATGAGTTTCATAAGGTTGGTGTTGCTGTCAAAATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCATATTACAACACATTTTCCCATTGAAGAACATGCCGCATCTATACTCACACCTTATGCCTTTAAGTTGCTTCAACATGAGATTGAATTATCTACGAAGTATGCAGCAACTGAAACTGCCAAGGGCTCTTACGTTGTTCAACATCATACCAAAGTTGATGGTGGTCGTATAAGTTTCAATTTTCTGGAATATTATGTAGACATGCTATTCGAGTGCTAA 1443 0.3548 MTHSDLNLRNDASDWPLPHVTNIDEWVPFEGQIFEDDEYMNSLTFQDHQHEPLPQVNSIDERVPFEGQIFETQEDAYEFYCLFSKRNGFSIRRHHIYKSRKNESKENPSGVYKREFVCHRGGVGKPRKTVEVGSQRKRKSSRCDCSAKMLVAKRTIGFEEKWVVKYFNNSHNHELLDDKEVQFLPAYRNIPIVDQSRILLLSKAGCSVSLIMRVLELEKEIGTGNLPFLEKDIRNFMQSHSDIGKESDASDVLKLCKSLKDKDEAFRYEFTIDESNKLEHIVWAFGDSIRAYEAFGDVVVFDTTYRINRYEMPLGIWSFLAFMQGKYPKTILTDQDLAIKEDIAMELPNTKHAFCIWHIVAKLSSWFSFPLGSRYDDFKHEFHKVGVAVKIRNQAGEEARMRQKYHNPHITTHFPIEEHAASILTPYAFKLLQHEIELSTKYAATETAKGSYVVQHHTKVDGGRISFNFLEYYVDMLFEC* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2429 480 Pfam MULE transposase domain 317 361 IPR018289 -
Mal3g2429 480 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 62 317 - -
Mal3g2429 480 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 318 384 - -
Mal3g2429 480 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 389 463 - -
Mal3g2429 480 Pfam FAR1 DNA-binding domain 78 176 IPR004330 -
Mal3g2429 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 317 IPR031052 GO:0006355
Mal3g2429 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 318 384 IPR031052 GO:0006355
Mal3g2429 480 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 389 463 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2429 Mal-Chr3 95473092 95475083 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g2429 FAR1 3.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2429 - - ccaj:109802755 635.565