Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2419 ATGTTCTACACTTCTCAAGCTCTTGGTGGTCACCAAAATGCTCACAAACTTGAAAGAGCTGCTGCTAGAACAAGAACTATCAACCTCAACAACACCAACAACATCCCCAACAACAATAACAACAACAATGTTGTTTCTTCTTATTCATCACCACCACAACCATTTTCTTCACCCTTAACTGTGTCAGAACATGAACATGAAAATGGTGGTTTCTTTCATCATCATCATTACCCTTATTGGCAACAACTTGAACAAATTGAACCTTTACGGTTTCAAACACCAACAAACACTCTTCCTATGGTTCCTTGCAATGGTTATGGTGTTGATTATGCTGGTTTTGGTGCTTCATCTTCCACTCCTCACTATGTTTTCTCCAACAATGATTCTGTTTCTCCACATCAGTTTGTTGATGCTTCTGACCATGTTAATCTTGATCTCACTCTTCCTATGGTTCCTTGCAATGGTTATGGTTATGATTAG 480 0.3875 MFYTSQALGGHQNAHKLERAAARTRTINLNNTNNIPNNNNNNNVVSSYSSPPQPFSSPLTVSEHEHENGGFFHHHHYPYWQQLEQIEPLRFQTPTNTLPMVPCNGYGVDYAGFGASSSTPHYVFSNNDSVSPHQFVDASDHVNLDLTLPMVPCNGYGYD* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2419 159 PANTHER ZINC FINGER PROTEIN JAGGED 2 149 IPR045320 GO:0003700
Mal3g2419 159 PANTHER OS02G0182300 PROTEIN 2 149 - -
Mal3g2419 159 MobiDBLite consensus disorder prediction 28 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2419 Mal-Chr3 95324129 95325015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2419 2 40 C2H2 Transcription Factor Family AT5G14010 66.667 4.70e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2419 - - mtr:MTR_7g083210 144.821