Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2410 ATGAAGATATTGAGTTCGCACCCGAAAGGGATCTCCATTGGAGACCTTCGTGCAAAATTGATTAAGTGTGATCCGCCTTTGGGTAAACGCTTCTATGGATATAAAAAGTTTTCCAACATTCTAATATCTATACCACATGTACAACTCGAGTATTTAGGAGAAGGTAATTTTTGGGTGTGTTTGGTCTCAAAATGGACATCCACTATTAAGAACAAGCAGGAGGACACCACTACAACTCAAAAGCTACACAATGATGTTAGTCATCCTCCGCAACCTCAGTGGGATAACATTAGGGTTTCAGTATGGTGGGACTTTGACAGTTGTCCCGTCCCTTCCGACGTTAGCTTTTTAAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGGATTAAGGGCCCTATTCATATTGACGCTTATGGCGATGTTTCTCATCTTTCAGAGATCCAACAAGAAGCACTTTTCTTCTCCGGCATTGATCTCCACCACATTCCCGGTGCTTTTTTCTTACCTTATAACTATTATTACTTTCATTTTTAG 543 0.4052 MKILSSHPKGISIGDLRAKLIKCDPPLGKRFYGYKKFSNILISIPHVQLEYLGEGNFWVCLVSKWTSTIKNKQEDTTTTQKLHNDVSHPPQPQWDNIRVSVWWDFDSCPVPSDVSFLNVAPSIMGVLRANGIKGPIHIDAYGDVSHLSEIQQEALFFSGIDLHHIPGAFFLPYNYYYFHF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2410 180 PANTHER EMB|CAB71880.1 2 85 - -
Mal3g2410 180 PANTHER EMB|CAB71880.1 91 167 - -
Mal3g2410 180 Pfam NYN domain 98 166 IPR021139 GO:0004540
Mal3g2410 180 ProSiteProfiles OST-type HTH domain profile. 1 63 IPR025605 -
Mal3g2410 180 Pfam OST-HTH/LOTUS domain 2 58 IPR025605 -
Mal3g2410 180 PANTHER LIMKAIN B LKAP 2 85 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal3g2410 180 PANTHER LIMKAIN B LKAP 91 167 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal3g2410 180 CDD PIN_limkain_b1_N_like 98 166 - -
Mal3g2410 180 Gene3D - 1 62 IPR041966 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2410 Mal-Chr3 95012521 95013063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2410 98 168 C2H2 Transcription Factor Family AT5G61190 37.333 1.47e-09 54.7