Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2392 ATGGGTGTAATGTCTGAGAAACCCCTTCAAGAACTTTCTCTGCACTCAACAGACACCACATTTTCTCCTCCTTCACCTAAGAGGTTGGAAGGAAAAATAGCTATTGTAACAGGTGGAGCCAGAGGAATTGGAGAAGCAACAGTGAGAATTTTTGTGAAACATGGTGCAAAAGTGGTAATTGCCGACATTGAAGATGAACTTGGAATCATGCTTGCAAATTCACTCTCTCCATCAGCTATTTATGTCCATTGTGATGTTAGTGTTGAAAAAGATGTTGAAAATTTAGTCACTTCAACAGTTTATCACTATGGAAAACTTGACATAATGTTCAACAATGCTGGCGTTCTTGGAAACCAATCCAAGAACAAAAGCATTTTGAACTTTGACACCGAGGAATTCGACCGAGTCATGAGTGTTAATGTGAAAGGAGTTGGATTAGGAATGAAACATGCTGCAAAGGTTATGATTCCTAGAGGAGTTGGATGCATAATTTCCACTGCCAGTGTAGCTGGAGTTTTAGGAGGACTTGGTCCACATGCTTATACAGCTTCAAAGCATGCTATAGTTGGATTAACAAAGAATGCTTCTTGTGAATTAGGAAAATATGGGATTAGGGTTAATTGCATTTCTCCATTTGGTGTTGCAACATCTATGCTTGTGAATGCTTGGAGAAAAGGGGATGATGATGATGATGAAGTTAATAATGGAATTAATTTTGGATTGCCTTTAATTGAGGAAGTTGAGAAAATGGAAGAATTTATTAGAGGGATTGGTAATTTGAGAGGAACAACTTTAACTACTCAAGATATTGCTGAGGCTGTTCTTTATCTTGCTAGTGATGAATCTAAGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGAATTACTTCCTCAAGAAATTGTATTGGATTGTGA 918 0.3769 MGVMSEKPLQELSLHSTDTTFSPPSPKRLEGKIAIVTGGARGIGEATVRIFVKHGAKVVIADIEDELGIMLANSLSPSAIYVHCDVSVEKDVENLVTSTVYHYGKLDIMFNNAGVLGNQSKNKSILNFDTEEFDRVMSVNVKGVGLGMKHAAKVMIPRGVGCIISTASVAGVLGGLGPHAYTASKHAIVGLTKNASCELGKYGIRVNCISPFGVATSMLVNAWRKGDDDDDEVNNGINFGLPLIEEVEKMEEFIRGIGNLRGTTLTTQDIAEAVLYLASDESKYVSGHNLVVDGGITSSRNCIGL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2392 305 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 305 - -
Mal3g2392 305 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 104 115 IPR002347 -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 155 171 IPR002347 -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 202 219 IPR002347 -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 33 50 IPR002347 -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 181 200 IPR002347 -
Mal3g2392 305 PRINTS Glucose/ribitol dehydrogenase family signature 260 280 IPR002347 -
Mal3g2392 305 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 4 305 - -
Mal3g2392 305 Gene3D - 22 303 - -
Mal3g2392 305 CDD secoisolariciresinol-DH_like_SDR_c 28 297 IPR045309 GO:0016616
Mal3g2392 305 Pfam Enoyl-(Acyl carrier protein) reductase 38 232 - -
Mal3g2392 305 Pfam Enoyl-(Acyl carrier protein) reductase 249 297 - -
Mal3g2392 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 169 IPR002347 -
Mal3g2392 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 200 IPR002347 -
Mal3g2392 305 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 115 IPR002347 -
Mal3g2392 305 MobiDBLite consensus disorder prediction 10 24 - -
Mal3g2392 305 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 297 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2392 Mal-Chr3 94463740 94465187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2392 12 297 Acyl Lipid Metabolism Gene Families AT1G63380 29.530 4.56e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2392 - - gmx:100775210 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2392 3 94463740 94465187 Mal3g2392 3 94463740 94465187 ECH
Mal7g0932 7 25848278 25854609 Mal3g2392 3 94463740 94465187 PCT