Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2384 ATGACTATGGATGATCATCAATATCATAACTGGGAAACTTCTGAATTTAATAGTAATAATAATATTAATCATAATCATAATCATAATCATAATGATGTTCCTAAATTCAAATCTGTTCAACCACCTTCATTACCTCTTTCTTCTTCACCTAATTCATCTTCTTTTCACTTACCATTTTCATCTACTTTTAGTCCAAGTGATTTCATGATCTCACCTTTCTTTCTCTCTTCTCCAAATGTTTTTGCTTCTCCAACTACTGAAGCTTTTGCTAACCAAAGCTTCAACTGGAATAAGAACAGTTTAGGAGAAGAAGAGCAAGAAGGTGATAAGAAGAATGAGAAAAACTACTCTGATTTCTCTTTTCCAACTCAAACAAAGCCTGAATCTGTTTTTCAATCTTCCTCAAACATGTTTCAACTGGAACAAACTAAGAAACAAGACATATGGAAATTCAATGAACCTACAAAGCAAACAGATTTTTCATCTGAGAGGACAGAACCAAAATCTGAATTCCAATCAACTCAGAACTTTTCCTCGGAAATGGCGATAATTAAACCGGAAATACATAGTAACTCAGTTACTGGATCTGGTTATTATAACTACAATAATACATCTCAATCTGTTAGAGAACAGAAGAGATCAGAAGATGGTTACAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCGCGCAGTTATTACAAGTGCACGAATCCGAGTTGCTCAATGAAAAAGAAAGTTGAGAGGGATTTAGATGGACAAATTACTGAAATTGTATATAAGGGAACTCATAATCACCCTAAGCCTCAGTCTAATAGAAGAACAAACTCTCAACCTACTTCATCATGCACTAACTCCGGGATTTCGGATCAATCAGCGATGGATCATGTCTCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGATGAGGACTTTGAGCAAACATCACAAACTAGTTATTCGGGTGGAAATGATAACGGCCTTGTACCGGAGGCAAAAAGATGGAAGGGTGATAATGAAAATGAGGGCTATTGTGCCTCAGGTACGAGAACTGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATCCTTGATGATGGTTTTCGGTGGAGAAAATATGGACAGAAAGTTGTTAAAGGAAATCCTAATGCAAGGAGTTATTACAAATGCACTGCCCCTGGTTGTTCAGTGAGAAAACATGTCGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACTTACGAAGGAAAACACAACCATGACGTACCAGCTGCACGTGGTTCTGCAGGTTACAACATGAACAGAAATTCTATGAATAACAGCAACGTGCCGGCGCCTATTAGGCCCTCAGCGGTGAATTGTTATTCTAACTCATCAAGTTTCACAAATTCAGTTTATAACAAGACTGAGCTACCTACAAACGGAAATCACGAGTCATTTCCAACAGACATGTTCCAGGGTCAAGGAAGTTTCGGGTATTCATCTCTCGGAAGATCGATGGATTCATCAGCCAATCATTCACAATACTCAGATGCTGCATACTTAAAGGCCAAGGATGAGAGGAAGGATGACTCATTCCTTCAGTCATTTCTCTCAAAAGACTTCTAA 1635 0.3786 MTMDDHQYHNWETSEFNSNNNINHNHNHNHNDVPKFKSVQPPSLPLSSSPNSSSFHLPFSSTFSPSDFMISPFFLSSPNVFASPTTEAFANQSFNWNKNSLGEEEQEGDKKNEKNYSDFSFPTQTKPESVFQSSSNMFQLEQTKKQDIWKFNEPTKQTDFSSERTEPKSEFQSTQNFSSEMAIIKPEIHSNSVTGSGYYNYNNTSQSVREQKRSEDGYNWRKYGQKQVKGSENPRSYYKCTNPSCSMKKKVERDLDGQITEIVYKGTHNHPKPQSNRRTNSQPTSSCTNSGISDQSAMDHVSIQEDSSASVGDEDFEQTSQTSYSGGNDNGLVPEAKRWKGDNENEGYCASGTRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSAGYNMNRNSMNNSNVPAPIRPSAVNCYSNSSSFTNSVYNKTELPTNGNHESFPTDMFQGQGSFGYSSLGRSMDSSANHSQYSDAAYLKAKDERKDDSFLQSFLSKDF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2384 544 MobiDBLite consensus disorder prediction 265 350 - -
Mal3g2384 544 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 Pfam WRKY DNA -binding domain 215 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 MobiDBLite consensus disorder prediction 269 329 - -
Mal3g2384 544 SUPERFAMILY WRKY DNA-binding domain 364 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 34 542 - -
Mal3g2384 544 Gene3D WRKY domain 359 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 MobiDBLite consensus disorder prediction 101 128 - -
Mal3g2384 544 SUPERFAMILY WRKY DNA-binding domain 210 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 SMART WRKY_cls 214 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 MobiDBLite consensus disorder prediction 202 240 - -
Mal3g2384 544 MobiDBLite consensus disorder prediction 12 27 - -
Mal3g2384 544 MobiDBLite consensus disorder prediction 1 51 - -
Mal3g2384 544 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 542 IPR044810 GO:0003700
Mal3g2384 544 Gene3D WRKY domain 200 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g2384 544 MobiDBLite consensus disorder prediction 102 116 - -
Mal3g2384 544 MobiDBLite consensus disorder prediction 156 176 - -
Mal3g2384 544 ProSiteProfiles WRKY domain profile. 209 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2384 Mal-Chr3 94138459 94141122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2384 60 540 WRKY Transcription Factor Family AT2G38470 45.437 2.29e-112 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g2384 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2384 K13424 - gmx:100776837 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2384 3 94138459 94141122 Mal3g2384 3 94138459 94141122 ECH
Mal3g2384 3 94138459 94141122 Mal7g0220 7 5178364 5181454 PCT