Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2349 ATGAAGATTGATACTGTTTCTGGACAAAGAAAATCACGCAAGAGACGCAGTGGTGGAAGAACCGACTCAGTTGAAGACACTCTTGAGAAGTGGAAGAACTACAACAGACAGCAACAACAAAGACTTGGTTGTGGAGATAATGGAGCTGAAAAGATTCATAAAGTTCCTGCGAAAGGTTCAAGAAAAGGGTGCATGAGAGGTAAAGGTGGTCCTCAGAATTCAGATTGCAATTTCAGAGGAGTTAGACAGAGGATTTGGGGTAAATGGGTTGCTGAGATTCGCGAACCTATCAATGGTAAACATGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTCACTACAGCACATGATGCTGCTCTTGCTTATGATAAAGCAGCTAAGGCTATGTACGGACCTAGTGCTCGTTTGAACTTCCCTGATGGATCACCATCATCATCAAGTGGTGGTTCTGCAGATTCTTTGAATGGCGAGGAAGATATTGGAAAAGCTGAAGAGTTGGAGGCTAATCTTCATCAGTCTGATGAAGAGAATAAGATTCTTTCTAAAGATTTTGTTGCTGATGACGACTCAGTAGAGGAATCGAAGGAAGTGATAATTGGTACTATCCAATGTCAAACAAATAAAAGATGTAAGAAAATGGTTCGTCAAGGGTCTTACAAGAATGTTAAATCTGAAAAACCTGGCAAAAACGAACAACTAGAGGGTGAATTAGAGAAGATTCTAGCGAATTCTGGCATGGGTGGAGGGTGTAATCATGTGCATAAGGAGCCTATGGATACAGGAATGAACTCAAGAGCTGATTGTAGATCTTCTGATATAGCAGAAAATGGGATTCTGGTGCAGAGTGAAGAAACAATAAGAGGATCAGTGGAGGATTTGAAATCCTTTGAGTTGAGCTGCAGCAACCATTTCCTTGGAAACCTGCACAATATGTTCCCAGATAGCGATCCAAGACCAAATTCTGAGCGTTGTAACATCAAAACCGAGGCTTATCTTGCAAAGAAACATAACAAGGAAGTAAGTGGAGATTTCTTAAGCCACGCTCAGCCACAAAATGAGCAAAATAAAAATGGATATTTTGATGAGATCAAAACTGAGCTTAAGGGATTGGAATACAAGCTGAGAGGCCAATCTATCGATTGCAAGAATGATGAGGCACACGTAGTACCTTACATGCAGGGTATTGATCTGTTTGGTGGTGGCAGTGTTGGACCAATTGAAAGAATGCCCCAAATTGAAGCTTTGAACAATACTAATAAAGGCACTAAATTAAAAGAGAGAGGAAATAATGGAAGTGCACTGCATGGATTTAGTGCAGGACAAAGTAGGAAGCTGAGTGATCTTTCTCAACAGCTGCAGAAATTGGGTGGTTACTTGCCTGAAAATTGGAATAATATGCAGTTTGCAGATCTTGAAGTTGGTTATGATTATAGTTTCTTAAAACCTGATTATGATTTTGGCTTATTAGAAGAGAAGAAGTTACTAGATATATGTTTTTCACATATAGGATCTTGA 1521 0.3984 MKIDTVSGQRKSRKRRSGGRTDSVEDTLEKWKNYNRQQQQRLGCGDNGAEKIHKVPAKGSRKGCMRGKGGPQNSDCNFRGVRQRIWGKWVAEIREPINGKHVGEKANRLWLGTFTTAHDAALAYDKAAKAMYGPSARLNFPDGSPSSSSGGSADSLNGEEDIGKAEELEANLHQSDEENKILSKDFVADDDSVEESKEVIIGTIQCQTNKRCKKMVRQGSYKNVKSEKPGKNEQLEGELEKILANSGMGGGCNHVHKEPMDTGMNSRADCRSSDIAENGILVQSEETIRGSVEDLKSFELSCSNHFLGNLHNMFPDSDPRPNSERCNIKTEAYLAKKHNKEVSGDFLSHAQPQNEQNKNGYFDEIKTELKGLEYKLRGQSIDCKNDEAHVVPYMQGIDLFGGGSVGPIERMPQIEALNNTNKGTKLKERGNNGSALHGFSAGQSRKLSDLSQQLQKLGGYLPENWNNMQFADLEVGYDYSFLKPDYDFGLLEEKKLLDICFSHIGS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2349 506 MobiDBLite consensus disorder prediction 139 159 - -
Mal3g2349 506 Gene3D AP2/ERF domain 77 142 IPR036955 GO:0003700|GO:0006355
Mal3g2349 506 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Mal3g2349 506 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Mal3g2349 506 CDD AP2 76 140 IPR001471 GO:0003700|GO:0006355
Mal3g2349 506 SMART rav1_2 77 147 IPR001471 GO:0003700|GO:0006355
Mal3g2349 506 MobiDBLite consensus disorder prediction 1 77 - -
Mal3g2349 506 Pfam AP2 domain 76 133 IPR001471 GO:0003700|GO:0006355
Mal3g2349 506 SUPERFAMILY DNA-binding domain 77 142 IPR016177 GO:0003677
Mal3g2349 506 MobiDBLite consensus disorder prediction 140 155 - -
Mal3g2349 506 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 378 - -
Mal3g2349 506 Coils Coil 165 185 - -
Mal3g2349 506 MobiDBLite consensus disorder prediction 18 32 - -
Mal3g2349 506 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 378 - -
Mal3g2349 506 ProSiteProfiles AP2/ERF domain profile. 77 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2349 Mal-Chr3 93453997 93456323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2349 13 158 AP2-EREBP Transcription Factor Family AT2G40340 55.102 2.01e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g2349 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2349 - - cam:101505842 729.169