Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2319 ATGATTCAGCCAGAGATTCTTCATTCTACATGGCCATTAATCTATGAACACATAGACTCATCAACCTTTGATCACCATCATCATCATCATCATCATCTTCAAGTTGTTGAGCCCTATAACTTCACCATGGTTGACCATATTGATGACTATGATTCATATGGCATCATTATGGATGACCATGTTGAATATGATTATGAATTCAATACTCTATTAGGCACTTCAGAAAATAGTACTCTCTCTGAAATCTCCATACTCACCAATGATCATATCCAATTTCCAATTGATGAAGAAACCTTGGAACTTCCATCTCTAATGGAATTAGAATATTTTGATTCCATTATGAGTCCCCAAATTGGTAATATTCATGAACTTGAATACCAAGAAGAAAGTGAAGGGAGCTTCCCTTCACAAAATTTTCCACATAACCTCGAAGGTCAGAGTTCAAATACCCTCGGAGACAGTTGTAAAATGGTCGTCAGTGCCACTTATGATAATTTCCCTTCACAAAATTCTCCTTGTGATGCATGGAGTCCAACACTTTCAATGAAATCAGATTTTTCAACAATTCAACAATCACTTACTTTGCCACAAGAAAATATGGAAATTGAAAACCAAGTGAGTCTTCCACACTTGATGGAAGCACATGGAGAAGCCTTGGAGAAAGGACAAAAAGCACTAGCAGAAGTTAATTTGAAGTGTATAAGCCAAAAAGTTATTACTCCAATTGGTGACTCTCTTGAGACACTTGCATTTTATTTGGCTCAAGAAGTGACAAATCATGGAGATTATCTCAAAGCTGAGGCATACAAGAATTTTCAGGCTGCTTTTAAGGTACTTTATCAAGGGAATTTGGTTGGAAAAATTGCTCATTTTTCAGCTATTTCAGCAATTCTTGAAGCTGCTATGTTAGAAGATTGTGATGAAATTCACATAATTGATTTTTGTATTGGAAATGGTGTTCAATGGCCTTTTTTATTGGAGGCTGTTTCAAAAATGAACAAAAGATTGAAATTAACATCAATTAAATGGAGTGATGAAAATTCTGAATGTGTTTGGAATTTTGATGATACCAAAAGGGAACTTCATGAGTATGCTACATCATGTGGTTTGAAATTGAAGGTAGAGGAAAAGGGATTGGAAGACTTGGTTAGTGAGATCAAAATTATGAATTCGAGGAACGAGTTTTTGGCTTTTAATTTGATGATTGGTCTTCCTCATATGGGAATGGTAAGAAACAGAAGAAAACATGCTTTGGAGTTTCTAAAAGTAGCAGAGGATTTGATAAACAATTGTGGTAAAAAGGGAATTATTACTTTTGGTGATGGTGATGCATTTGAGAAACTGAAAAATAGTTTGAATTTCAAGTCATTTTTTGAAGGGAATTTGGTGCATTATAAGGCTTTGTTAGAATCAATTGAATCACAATTTTCAGAAAAATTCTCAGAAGCAAGAATTGCATGTGAAGTATTGTTTGTGGCACCTTGTATATCTTCTCCTGATTGGTTACAAACATGGGAAGAGATGAAAAGTGATGCTAATCTTAAAAGTGAGGTTAGCATTGAAGGTGGAAGATTGAGCAAAAATGTTTTGATGGAAGTAAGAGAAGTTTTGAGAGGAAGTGAAAATTCTTATCATGCAAGAATTGAAGGAGAAAATGAGAATCAAATTGTTTTGGAATGGAAAGGAACTCAACTGTTAAGATTCTCCATTTGGAAAAATTAG 1722 0.3449 MIQPEILHSTWPLIYEHIDSSTFDHHHHHHHHLQVVEPYNFTMVDHIDDYDSYGIIMDDHVEYDYEFNTLLGTSENSTLSEISILTNDHIQFPIDEETLELPSLMELEYFDSIMSPQIGNIHELEYQEESEGSFPSQNFPHNLEGQSSNTLGDSCKMVVSATYDNFPSQNSPCDAWSPTLSMKSDFSTIQQSLTLPQENMEIENQVSLPHLMEAHGEALEKGQKALAEVNLKCISQKVITPIGDSLETLAFYLAQEVTNHGDYLKAEAYKNFQAAFKVLYQGNLVGKIAHFSAISAILEAAMLEDCDEIHIIDFCIGNGVQWPFLLEAVSKMNKRLKLTSIKWSDENSECVWNFDDTKRELHEYATSCGLKLKVEEKGLEDLVSEIKIMNSRNEFLAFNLMIGLPHMGMVRNRRKHALEFLKVAEDLINNCGKKGIITFGDGDAFEKLKNSLNFKSFFEGNLVHYKALLESIESQFSEKFSEARIACEVLFVAPCISSPDWLQTWEEMKSDANLKSEVSIEGGRLSKNVLMEVREVLRGSENSYHARIEGENENQIVLEWKGTQLLRFSIWKN* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2319 573 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 40 572 - -
Mal3g2319 573 ProSiteProfiles GRAS family profile. 199 572 IPR005202 -
Mal3g2319 573 Pfam GRAS domain family 214 572 IPR005202 -
Mal3g2319 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 572 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2319 Mal-Chr3 92874622 92876343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2319 206 571 GRAS Transcription Factor Family AT1G07520 24.505 2.43e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal3g2319 GRAS 5.1e-29 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2319 - - mtr:MTR_7g069740 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2319 3 92874622 92876343 Mal3g2319 3 92874622 92876343 ECH