Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g2316 | ATGAGGGAGGAAGAAACATATGGATCAGAATGTTCCAAGGCAAGTGTTTCAATTAATGAAGATGGTTGTGAAATTAGTGAAGGAAATGAAGATGAGGAAAGTAATAAGCAAAACAACAACAATGGAGGAATAAGCTCAAGCAATAGTACTATAGAAGAGAATTGTGAGAAGAAATCATCAGTGAGGCCTTATGTTAGATCCAAGTTGCCTAGGCTACGTTGGACTCCTGATCTTCATTTTCGTTTTCTTCATGCTGTGCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTAAGTATTGCTCATGTGAAGAGTCATTTACAGATGTATAGAAGCAAGAAAGTAGTTGACACAAATCAAGTGTTGGCTGATCATAGGCTTCTTGTAGACAATGGAGATAGAAATGTTTATCATCTCACCCAACTTCCCATGCTTCAAGGCTATACTCCAAATCAAACTTCATCATATAGATGTGGATCATATGGGGATGCTTCTCTAGCCATGTATGAAAACATGGTGCAAATGAGTTCATTAAGTGAATCTAGAGCTAACTTCTATGGAAAAATGATTGAGAGAACCAACAATAACAACATTAATATGCAAGGTCATAGTTTTTTCCAAATGGATTCATCGAATTTTCGAGAATTATCAACAACTAAAGTCCATGAACCAAATCATAATTTCCTCTCATTTTGTGGCAATGAATCTTTAAGAGATGATCTACAAGTTCAGCCAAGAGCACAAGATCTCATTTCTAATGATAACTTGCCTGCAAATCAAATGGAAGAATTGAAGACAATGAAAAGAAAAGCTTCAAATATGGATCTTGAGTTGGATTTATCACTTAAATTAAATTCAAGGATCATTGGTGATAAAAAATGTATAGAGGAGCATGAAATTGAAAGCAAATTATCACTCTCTTTATATTCTCAATCATCTTATGTTTGCAAAAGGATGAAAGAAGAAGAAGATGGTTCTAAGGAGCAAGAGAAAGGAGTCAATATTTCTTTGGATCTAACCATATGA | 1059 | 0.3466 | MREEETYGSECSKASVSINEDGCEISEGNEDEESNKQNNNNGGISSSNSTIEENCEKKSSVRPYVRSKLPRLRWTPDLHFRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQVLADHRLLVDNGDRNVYHLTQLPMLQGYTPNQTSSYRCGSYGDASLAMYENMVQMSSLSESRANFYGKMIERTNNNNINMQGHSFFQMDSSNFRELSTTKVHEPNHNFLSFCGNESLRDDLQVQPRAQDLISNDNLPANQMEELKTMKRKASNMDLELDLSLKLNSRIIGDKKCIEEHEIESKLSLSLYSQSSYVCKRMKEEEDGSKEQEKGVNISLDLTI* | 353 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g2316 | 352 | MobiDBLite | consensus disorder prediction | 332 | 352 | - | - | |
| Mal3g2316 | 352 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Mal3g2316 | 352 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 126 | IPR017930 | - | |
| Mal3g2316 | 352 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 8 | 352 | IPR044848 | GO:0003700 | |
| Mal3g2316 | 352 | SUPERFAMILY | Homeodomain-like | 69 | 124 | IPR009057 | - | |
| Mal3g2316 | 352 | MobiDBLite | consensus disorder prediction | 35 | 54 | - | - | |
| Mal3g2316 | 352 | Pfam | Myb-like DNA-binding domain | 72 | 122 | IPR001005 | - | |
| Mal3g2316 | 352 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 70 | 125 | IPR006447 | GO:0003677 | |
| Mal3g2316 | 352 | PANTHER | - | 8 | 352 | - | - | |
| Mal3g2316 | 352 | Gene3D | - | 69 | 126 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g2316 | Mal-Chr3 | 92747519 | 92749198 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal3g2316 | 61 | 126 | G2-like Transcription Factor Family | AT2G42660 | 78.788 | 3.52e-32 | 119 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | GARP-G2-like | Mal3g2316 | Myb_DNA-binding | 3e-07 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g2316 | - | - | cam:101498576 | 412.149 |
Event-related genes