Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2312 ATGGAGTGTAACATTCCTTTTTGTAACAACAACACTGTCTCTTATTCTTCAGGTTCATCTTCAAAGAGAAAGGAGAAAAAAAAGTGTGTGAAAAAAACCAAAGGAACATCAGTGAAACTTTCAACTGATCCACAAAGTGTTGCAGCTAGAGAAAGAAGACATAGGATCAGTGATAGGTTCAAGATTCTTCAGAGTATGGTCCCTGGAGGAAGTAAATTGGACACAGTTTCTATGTTGGAAGAAGCTATTCATTATGTTAAGTTCCTTAAGACACAGGTTTGGCTTCATCAAAGAATGCTTAACTTTGTTGATGATATTGATGTGCCACTACCTATGTTTCTTCCTGAAGATTATTATTCTCAAAATGATAACACCATTCAGCATAATGCTTCAGGTTCAGTTGAGTCTGTGCAGAATTTGTCACAGTTACCACTAGAGCAGTTCTGTTTTCAAGGTGATGAAGATATCAAAACCATCTTAGATGCCACTATGAAATATTAA 501 0.3593 MECNIPFCNNNTVSYSSGSSSKRKEKKKCVKKTKGTSVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKLDTVSMLEEAIHYVKFLKTQVWLHQRMLNFVDDIDVPLPMFLPEDYYSQNDNTIQHNASGSVESVQNLSQLPLEQFCFQGDEDIKTILDATMKY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2312 166 Pfam Helix-loop-helix DNA-binding domain 50 89 IPR011598 GO:0046983
Mal3g2312 166 MobiDBLite consensus disorder prediction 14 36 - -
Mal3g2312 166 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 20 147 IPR045843 GO:0003700|GO:0006355
Mal3g2312 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 100 IPR036638 GO:0046983
Mal3g2312 166 CDD bHLH_AtIND_like 41 99 - -
Mal3g2312 166 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 20 147 - -
Mal3g2312 166 Gene3D - 43 103 IPR036638 GO:0046983
Mal3g2312 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 40 89 IPR011598 GO:0046983
Mal3g2312 166 SMART finulus 46 95 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2312 Mal-Chr3 92680476 92680976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2312 30 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 45.283 6.70e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g2312 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2312 - - gmx:113000114 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2312 3 92680476 92680976 Mal3g2312 3 92680476 92680976 ECH