Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2307 ATGACCCGTTCAGCCACCGCATTGTTCATCATCGGCGTCGCGTTGTGTTTCGTCTTTGAATCGCAAGCCAAATCAATCGACCCCTACAAGGTTCTTGGGGTTGATAAAACTGCAACTCAACGAGAAATTCAGAAGGCTTTTCACAAGCTCTCTCTTCAATATCACCCTGACAAAAACAAGGCCAAAGGTGCACAAGAGAAGTTTGCGCAGATAAATAATGCGTACGAGATTTTATCTGATGAACAAAAGAGGAAGAATTATGACTTATATGGAGATGAGAAAGGAAATCCTGGATTTGAAGCTGGTCATGCTGGAGGTTATGGTGGTCCTGGCGGCTTTAACTTCAGACCAGGGGAACAACAATGGGGTAGGGGTGACCAGGGAGGCTCGAAGTCATTCTCCTTTTCCTTTGGCGGTGGCTCTGGTGATTCAAATTCTTTTGGATTTGGTTTGAATGATCTTCTCGGCAACTTTTTTGGTGATTTTGGCAGTTCATTTAGGTCTCAGTCGTCTCAATTTGGGTCCAAGAGTTCCCCCAAAAGTTTGAAAGCCATAAATTCAAATATCTACAAGAAAGAAATAGTTGATGAAGGAATGACTTGGCTTTTGGTATCTTATTCCAAGGGTCCAAGGGTCATCGAACGCTTCGAGTCCATTATAGGGGAGGTTTCCGATACATTGAAAGGAGCTTTGAAGGTTGGAAGCATTAACTGTGAAAAGGAAGTCTCACTATGTAAGGAGCTCGGTGTATATCCGCGCAAGGCTCCAAGGCTTTTTGTTTACTCTTACAAGGAGAATGTAAAGGGTTCTCTGGTGGAGTACGGCGGTGAATTAGCTGTTAAGGATTTGAAGGCTTTCTGTCAACAACACTTGCCAACGTTTTCAAAACGGATTGACTTGAATCAACTTGATCAGTTTAGCACTACTGGAAAGTTGCCTAGGGTGCTGCTTCTCTCTACCAAAAAGAACACTCCCGTAATTTGGCGTGTTCTTAGTGGCCTCTATCGCAAACGCATTACTTTCAGTGATGTAGAGGTTCACGATGATTCTGATTCGAGAGTGAAAAAGCTACGAGTTGATGCACTTCCAGCTATAGTAGGTTGGCTGCCTAATGGAGAAAAGCTTATTTTGAAAACAGGGGTTTCTGTGAAAGATATAAAATCTGGTGTACAAGATCTTAGTAACATACTTGATAGTTTTGAGAAAATAAGTAAAAAGGAAACATCAAGTCAGTCCAAGAAAGAACAAGCTGATTCAGAAGACGGACACATTCAGTTGCTTTCCCGGTCAAACTTTGAGGCTCTCTGTGGGGAGATATCTCCAGTTTGCATAATTGGTGCCTTCAGATCTTCAAAATCAAGGGAAAAGCTTGAATCACTTCTCTCTTTGGTCTCACAGAAGTCCTTGTCAAGAAAACCAAATGGCGGCGGCAGCTCTAGGGACTCCATTTCCTATGCTCTGTTAGATTCTGCAAAGCAGCAAGCCTTTCTAACTGCATTTGACAAAACAGGTTATAAATCATCAGATAAGTTATTGATTGCCTACAAACCTCGGAAAGGGAAATTCACTGTATTTACGGGTGAAATGACTATAGAGGAAGTAGAGAATTTTATTAGCTCCATTCTTAGTGGAGATATACCCTTTAGGGAAACACATAAGAAGCCTGTACTCAAATAG 1677 0.4198 MTRSATALFIIGVALCFVFESQAKSIDPYKVLGVDKTATQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFEAGHAGGYGGPGGFNFRPGEQQWGRGDQGGSKSFSFSFGGGSGDSNSFGFGLNDLLGNFFGDFGSSFRSQSSQFGSKSSPKSLKAINSNIYKKEIVDEGMTWLLVSYSKGPRVIERFESIIGEVSDTLKGALKVGSINCEKEVSLCKELGVYPRKAPRLFVYSYKENVKGSLVEYGGELAVKDLKAFCQQHLPTFSKRIDLNQLDQFSTTGKLPRVLLLSTKKNTPVIWRVLSGLYRKRITFSDVEVHDDSDSRVKKLRVDALPAIVGWLPNGEKLILKTGVSVKDIKSGVQDLSNILDSFEKISKKETSSQSKKEQADSEDGHIQLLSRSNFEALCGEISPVCIIGAFRSSKSREKLESLLSLVSQKSLSRKPNGGGSSRDSISYALLDSAKQQAFLTAFDKTGYKSSDKLLIAYKPRKGKFTVFTGEMTIEEVENFISSILSGDIPFRETHKKPVLK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2307 558 Coils Coil 61 81 - -
Mal3g2307 558 Pfam DnaJ domain 27 88 IPR001623 -
Mal3g2307 558 SUPERFAMILY Thioredoxin-like 182 292 IPR036249 -
Mal3g2307 558 PANTHER DNAJ PROTEIN ERDJ3A 7 558 - -
Mal3g2307 558 CDD DnaJ 27 80 IPR001623 -
Mal3g2307 558 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Mal3g2307 558 PRINTS DnaJ domain signature 83 102 IPR001623 -
Mal3g2307 558 PRINTS DnaJ domain signature 29 47 IPR001623 -
Mal3g2307 558 PRINTS DnaJ domain signature 47 62 IPR001623 -
Mal3g2307 558 PRINTS DnaJ domain signature 63 83 IPR001623 -
Mal3g2307 558 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Mal3g2307 558 SUPERFAMILY Chaperone J-domain 23 116 IPR036869 -
Mal3g2307 558 Gene3D Glutaredoxin 179 299 - -
Mal3g2307 558 Gene3D DnaJ domain 25 171 IPR036869 -
Mal3g2307 558 PANTHER DNAJ PROTEIN ERDJ3A 7 558 - -
Mal3g2307 558 SMART dnaj_3 26 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2307 Mal-Chr3 92565044 92568103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2307 29 90 C2H2 Transcription Factor Family AT1G74250 41.176 4.51e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2307 - - gmx:100796871 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2307 3 92565044 92568103 Mal3g2307 3 92565044 92568103 ECH